Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4411 ATGGAATCCAATAATTCACCTCTCAACCAAACAAAACTTGTGCATCCAAACAATAACCATGATCATGAACAAAATGCAACACTCGAGATCCAAAGCGACGAGTTCGATTACTCGAAAAGATCACAATGGCTTCGCGCCGCGGTATTAGGAGCTAACGACGGATTAGTTTCAACAGCGTCGCTAATGATGGGTGTAGGAGCAGTGAAACAAGACATCAAAGCCATGATCTTGTCCGGTTTCGCAGGCCTCGTAGCCGGTGCATGTAGCATGGCAATAGGTGAGTTTGTATCTGTTTACTCACAGCTTGACATTGAAATAGCTCAAATAAAAAGAGACAAAAACAATATTGAAGATGTTGTTGTTGAGAAAGAAAGTTTGCCAAATCCTTTACAAGCTGCAGCAGCTTCGGCTTTGGCATTTTCAGTTGGTGCAATGGTGCCACTTCTTGCAGCATCTTTTATTAAAGATTATAAGTTAAGAGTAGGTGTTGTTTTGGTAGCAGTTAGTTTTGCTTTGGTTGTGTTTGGTCTGTTGGGAGCAGTGTTGGGTAAGGCACCTGTTTTGAAGTCTTGTTTGAGGGTCTTGCTTGGAGGTTGGATTGCTATGGCTATTACTTTTGGGCTAACTAAGTTGATTGGATCAAGTGGGCTTTAG 654 0.4205 MESNNSPLNQTKLVHPNNNHDHEQNATLEIQSDEFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEIAQIKRDKNNIEDVVVEKESLPNPLQAAAASALAFSVGAMVPLLAASFIKDYKLRVGVVLVAVSFALVVFGLLGAVLGKAPVLKSCLRVLLGGWIAMAITFGLTKLIGSSGL* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4411 217 MobiDBLite consensus disorder prediction 1 24 - -
Psa6g4411 217 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 5 214 IPR008217 GO:0005384|GO:0030026
Psa6g4411 217 CDD Nodulin-21 42 186 - -
Psa6g4411 217 Coils Coil 99 119 - -
Psa6g4411 217 Pfam VIT family 122 209 IPR008217 GO:0005384|GO:0030026
Psa6g4411 217 Pfam VIT family 44 119 IPR008217 GO:0005384|GO:0030026
Psa6g4411 217 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 5 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4411 Psa-Chr6 388830731 388833294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4411 1 217 Nodulin-like Gene Family AT3G43660 66.359 3.69e-100 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4411 K22736 - gmx:100814343 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g2214 1 168460318 168462130 Psa6g4411 6 388830731 388833294 PCT