Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4406 ATGAAGCGGAACCTCTATCTTCTTGATTGTTTTGCACGACCTTTCTTCTACAGTCTTGCTGCTATTGAGTGGCTCTGCCTTCGTATGGAGCTCCTGTCCACCTGTGCATTTTCTTTCTGCATGCTATTGCTTGTTAGCTTTCCCCATGGAAGTATTGACCCTAGCATGGCTGGACTTGCTGTGACATATGGTCTGAATTTAAATGCGCGGTTATCCCGTTGGGTACTTAGCTTTTGCAAATTTGAAAACAAAATAATTGAAAGAATTTATCAGTACAGCCAAATTCCTAGTGAAGCACCGGCAGTTATTGAAGATTCCCGCCCTTCATCCTTATGGCCTGAAAACGGGACAATTGAAATAGTTGATTTGAAGGTCCGTTACAAAGAAAATCCTCCTTTGGTGCTTCATGGAGTATCATGCATATTTCCTGGTGGGAAGAATATAGGAATAGTTGGACGCACCGGCAGTGGCAAATCTACATTGATTCAAGCATTGTTTCGACTGATTGAACCTGCAGAAGGAAGTATCCACATAGACAACATCAATATTTTACACATCGGTCTTCATGACCTCCGAAGTCATCTCAGTATCATACCACAGGATCCGACCTTGTTTGAAGGGACCATTCGAGGCAATCTTGATCCTCTTGAGGAGCACTCCGATAAAGACATTTGGGAGGCACTAGATAAGTCTTAA 696 0.4282 MKRNLYLLDCFARPFFYSLAAIEWLCLRMELLSTCAFSFCMLLLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWVLSFCKFENKIIERIYQYSQIPSEAPAVIEDSRPSSLWPENGTIEIVDLKVRYKENPPLVLHGVSCIFPGGKNIGIVGRTGSGKSTLIQALFRLIEPAEGSIHIDNINILHIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKDIWEALDKS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4406 231 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 229 - -
Psa6g4406 231 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 229 - -
Psa6g4406 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 229 IPR027417 -
Psa6g4406 231 Pfam ABC transporter 135 230 IPR003439 GO:0005524
Psa6g4406 231 Gene3D - 101 231 IPR027417 -
Psa6g4406 231 Gene3D ABC transporter type 1, transmembrane domain 1 99 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4406 Psa-Chr6 388637834 388638642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4406 116 213 Calmodulin-binding Proteins AT2G36910 33.333 1.27e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4406 - - gmx:100790550 416.001