Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4402 ATGATTCGTTACGTGAATCTCGTCTTCCTTGTGTTCTCAGCAACTTTGATTTCTTACGGCTTCGCATTCACCAATCCATTTGACGTTACAGCCCTCCAGGATCTATACAGGAGCTTAAACAACCCTCAAGGGCTACACGGATGGAACGGTGGTGATCCTTGTGAGGAGAGTATTGGACAGGAGAATTTAAGCCACAATTTCTTGTATGGACCAATTGGCAATGTGTTCACTGGCTTAGATAATCTCAAGGAAATTTTAGACTTGAGAAGCAAGAAAGAGGATGCTAATTTGGAAAAGAAAATAAATGATCTGTCACCTGTGGGTACTTCTGATGCTGTTGCTTCGCTGAGAAACTTATCAATGAAGTCCTTGCTGAGGCTGAAGCGGGGCTTCTGCGGTGGTGGTACTAACGGATGGCTGCACAATCTGGGGGTCGGCCTTATAATTGGTAAAGAAGGAGAAACAATTAAGAGTAATGCAAGCTTCTACTGGAGCACGGATTCAGATCGAATTTTGATCCAACTCCAATCCGGCTCAGAATTCGGTGCGGTGGATTTTCAGAGAATCGCAGAGTCATCACTGCGGTGTTTATGTGGCGAAGTGGTCACGCGAGAGGGAAGTGAAGTGAGCTTCTCAGAGATGAACTGTGAAGAATGA 657 0.4505 MIRYVNLVFLVFSATLISYGFAFTNPFDVTALQDLYRSLNNPQGLHGWNGGDPCEESIGQENLSHNFLYGPIGNVFTGLDNLKEILDLRSKKEDANLEKKINDLSPVGTSDAVASLRNLSMKSLLRLKRGFCGGGTNGWLHNLGVGLIIGKEGETIKSNASFYWSTDSDRILIQLQSGSEFGAVDFQRIAESSLRCLCGEVVTREGSEVSFSEMNCEE* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4402 218 PANTHER OS01G0253100 PROTEIN 61 86 IPR045271 GO:0004714|GO:0006468
Psa6g4402 218 PANTHER OS01G0253100 PROTEIN 4 58 IPR045271 GO:0004714|GO:0006468
Psa6g4402 218 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 4 58 - -
Psa6g4402 218 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 61 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4402 Psa-Chr6 388235258 388238744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4402 7 88 Strubbelig Receptor Gene Family AT5G06820 40.426 1.21e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4402 - - cam:101498175 89.7373