Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4390 ATGGCGTCCTCCAAGCTCATGTCTTCTTCCAATTCAATCAACTCCGACACACCTTCGTCTCCATCTTCCAAACCTCATTTCACCACATCCAATTTCCTCTCCGTTCCCGACACTTCCAACTTCTTCACCGATCAAACCTCACTGGCTGACGCGGTAGCAACTCCGAGAACGGTTGACGATGTTTGGAGAGATATTGTCGCCGGAGATCACAGGGAGTGTAAGGAGGAGATTCCGGACGAGATGATGACGCTTGAGGATTTTCTCGTGAAAGCCGGTGCGGTTGACGGTGAAGACGTGGATGGTGATGTTAAGATGAGTATACCTATGACGGAGAATCTCAGTGGGAGTGGTGTGTTTTCTTTGGATGCGAGTTTTCAAGGAATTGAGAGTGTGGAAGGGTCTGTGGCAGGGTTTGGGAATGGAGTAGAGGTGGTTGAAGGTGGGAAGGGTAAGAGAGGACGCCCGGTTATGGAGCAGTTGGACAAGGCTGCTCAGCAGAGACAAAGAAGAATGATAAAAAATAGAGAATCTGCTGCAAGGTCTAGGGAACGCAAGCAGGCTTACCAAGTGGAATTGGAGTCTTTGGCTGTGAAACTAGAGGAGGAAAATGACAGGTTGATCAAGGAAAAGGCTGAAAGGAAGAAGGAAAGGTTCAAACAGCTGAAGGTTGCTTGCTATCGATGA 684 0.4854 MASSKLMSSSNSINSDTPSSPSSKPHFTTSNFLSVPDTSNFFTDQTSLADAVATPRTVDDVWRDIVAGDHRECKEEIPDEMMTLEDFLVKAGAVDGEDVDGDVKMSIPMTENLSGSGVFSLDASFQGIESVEGSVAGFGNGVEVVEGGKGKRGRPVMEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDRLIKEKAERKKERFKQLKVACYR* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4390 227 MobiDBLite consensus disorder prediction 1 30 - -
Psa6g4390 227 SMART brlzneu 162 224 IPR004827 GO:0003700|GO:0006355
Psa6g4390 227 Gene3D - 164 219 - -
Psa6g4390 227 Pfam bZIP transcription factor 164 222 IPR004827 GO:0003700|GO:0006355
Psa6g4390 227 PRINTS cAMP response element binding (CREB) protein signature 104 119 - -
Psa6g4390 227 PRINTS cAMP response element binding (CREB) protein signature 161 177 - -
Psa6g4390 227 PRINTS cAMP response element binding (CREB) protein signature 179 199 - -
Psa6g4390 227 PRINTS cAMP response element binding (CREB) protein signature 199 216 - -
Psa6g4390 227 Coils Coil 185 216 - -
Psa6g4390 227 CDD bZIP_plant_BZIP46 166 212 - -
Psa6g4390 227 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 33 221 IPR043452 GO:0003700|GO:0045893
Psa6g4390 227 SUPERFAMILY Leucine zipper domain 166 217 IPR046347 GO:0003700|GO:0006355
Psa6g4390 227 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 216 IPR004827 GO:0003700|GO:0006355
Psa6g4390 227 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 169 184 IPR004827 GO:0003700|GO:0006355
Psa6g4390 227 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 33 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4390 Psa-Chr6 384708826 384713836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4390 56 221 bZIP Transcription Factor Family AT5G44080 54.706 6.50e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa6g4390 bZIP_1 8.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4390 K14432 - gmx:102659969 204.527