Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4359 ATGGCTTCTGCTGCTTCTTATACCTTTCTTCTAATCCTTACCTTTCTTTCAGTTTCTCATATCAAAGTATCTGAAGCACAAACTACACCTCCTATAGTAAAGGGACTATCATGGACCTTCTACAATTCAAAATGCCCTAAGCTTGAATCTATCATCAGAACCGAGCTCAAGAAAATCTTTGATAAAGACATTGGTCAAGCTGCTGGCTTGCTTCGCCTTCACTTCCATGACTGCTTTGTTCAGGGTTGTGATGGATCAGTATTATTGGATGGATCAGCAAGTGGACCAAGTGAGAAAGATGCACCACCAAACTTGACTCTTAGGACTGAGGCCTTCAAGATAATCGAAAAACTTCGTAGCATCGTCGAGAAGCAGTGCGGAAGAATCGTCTCTTGTTCTGATATCACCGCCGTTGCAGCGCGCGACGCTGTTTTTCTGTCAGGAGGACCGGAGTACAAAGTCCCATTAGGAAGAAGAGATGGATTAACATTTGCCACAAGAGAAGTAACATTACAGAACCTTCCTTCACCAACAAGCAACACAACAACAATCCTAAACTCACTTGCAACCAAAAACCTTAACCCAACAGATGTAGTAGCACTCTCAGGTGGTCATACAATAGGCATAAGCCACTGCAGTTCTTTCACAAACAGACTCTACCCAACACAAGACACTGTCATGGACAAAACCTACGGCAAAAACCTTAAACTCACTTGTCCTACTTCCACCACAGACAACACAACTGTTCTAGATATTCGTAGTCCGAACAAGTTTGATAACAAATACTATGTTGATCTCATGAATCGTCAGGGTCTTTTTACCTCGGATCAAGATTTGTACACTGATAAGAGGACTAAGGGTATTGTTACTGATTTTGCTGTGAATCAGTCTCTTTTCTTTGAGAAATTTATTGCTGCTATGCTTAAAATGGGCCAGCTTAATGTTTTGACTGGAACTCAAGGAGAGATTCGTGCGAATTGCTCTGTGAGGAATAAGGATAGCAAATCTTTCATTGCTTCTGTTGCGGAAGATGTGGTTGAAGGGTTTTTAGAAATGTAA 1059 0.4145 MASAASYTFLLILTFLSVSHIKVSEAQTTPPIVKGLSWTFYNSKCPKLESIIRTELKKIFDKDIGQAAGLLRLHFHDCFVQGCDGSVLLDGSASGPSEKDAPPNLTLRTEAFKIIEKLRSIVEKQCGRIVSCSDITAVAARDAVFLSGGPEYKVPLGRRDGLTFATREVTLQNLPSPTSNTTTILNSLATKNLNPTDVVALSGGHTIGISHCSSFTNRLYPTQDTVMDKTYGKNLKLTCPTSTTDNTTVLDIRSPNKFDNKYYVDLMNRQGLFTSDQDLYTDKRTKGIVTDFAVNQSLFFEKFIAAMLKMGQLNVLTGTQGEIRANCSVRNKDSKSFIASVAEDVVEGFLEM* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4359 352 PANTHER PEROXIDASE 25-RELATED 23 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 SUPERFAMILY Heme-dependent peroxidases 31 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 CDD secretory_peroxidase 35 329 IPR033905 GO:0004601|GO:0042744
Psa6g4359 352 PANTHER PEROXIDASE 23 334 - -
Psa6g4359 352 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Psa6g4359 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Psa6g4359 352 Gene3D - 39 328 - -
Psa6g4359 352 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 Pfam Peroxidase 53 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 ProSiteProfiles Plant heme peroxidase family profile. 35 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g4359 352 Gene3D Peroxidase, domain 2 176 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4359 Psa-Chr6 383351414 383353120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4359 8 352 Peroxidase AT1G71695 60.571 6.80e-163 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4359 K00430 - gmx:100775837 572.778