Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4357 ATGGGCTGTGTTCAAGCCAAACCATCAGAAGAATCTGATGAAGGTACTTCAAATTACAGAGGACTAAACAGATTCAAAATGGAAAATGGGTATGTTCCAAGTTCTGATTTTGTTGCTCACAGAAGATCCACTGGTCAGAGTCAAAAACATGTTGACCAGATTAAGAACTCTGATCATCATCGTGTCTATGAGAAACAACCCAGAAAACATAAAGTAGTTGTTGATTATAGTGTTGCTGGTAAGGGAAAGAGAAATGGTGAATTGAAAGATAGTAAGAAACAGTTGAACAAGTGTTTTGAAGATGAGCTGGTTGATGGATGGCCTAAATGGTTAGTTGATAATGTTCCTTCTCATGGGTTGGATGGTTTGGTTCCAAAGAGTGCTGAATCTTACAAAATGATTGATAAGGTAGGACAAGGAACCTATAGCAATGTTTATAAAGCTCTAGATCGAGACACAGGCGATATCGTGGCACTAAAAAAGGTCCGCTTCAATACATCGGAGCCTGAAAGCATTAAATTTATGGCAAGAGAAATTGCGATATTGCAGAGATTGGATCATCCCAACGTAGTGAAACTTAAAGGTTTAGCCACTTCAAGAATGCAGTACAGTATATATCTAGTTTTTGATTTCATGCCAACAGATTTATCAAGAATTATTTCTCGACCCGATGAAAGACTAACTGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTTCAGCATTGTCATGATAGAGGAATTCTGCATCGAGATATAAAGGGGTCGAATCTTTTGATAGATAAAACGGGGATGCTTCAGATTGCAGATTTTGGACTTGCTAATTATTATAGTACAAATCAAGACCAGCCTCTCACAAACCGGGTTGTGACACTATGGTACCGAGCTCCGGAGTTGTTGTTAGGCTCCACGGACTATGGAGTCGGTATTGATCTATGGAGTGCTGGTTGTCTCCTTGCAGAAATGTTTAGAGGAATTCCAATCATGCCCGGAAGAACTGAGGTTGAGCAACTTCATAGAATTTTCAGGCTATGCGGCACACCATCACAAGAGTATTGGAAAAAGTTGAAACTTTCTACAACTTTTATACCTCCAAAGTCTTACAGACCAAGTCTGGTAGAATCATTCAAGGATCTGCCCCCATCTTCTTTAGGTCTCTTATGTACACTTCTTGCTTTAGATCCTGCATTTCGTGGCAGTGCATCTAAAGCTCTTAAAAATCAGTTTTTCTTTACAAGCCCATTGGCTTGTGATCTGTCTGGTCTGCCTGCAATCTACAAAGGAGACGATGAGCATATTCAAGCCAAAGAACAGATCAAGTATATGAACTCTAAAATTAGGCGTTCGCGTACATATATGGAGCGTCGCAAGAATATAGCATCTAATAGGCCAATAGAACATACGGTATCATCTAAAGAGGTATTGAAAAGTAATGGTGAGGCTGAAACTTATGTTCCAAGTGAAGAACCAGGTAGTGCAACAAGTAGTACTTCATCTAGTGTAAACCAAGCTGGAATTGGGGACCATTCATCTCTCTTTCTCTCTCCATTTATGGCTTCTGATCAAAAGATGTCCCACAAAATCCATAGTCATGCTAATATTGGTGAAAAAAACACCAAGAACCTTCCTCCATTATCCAAGTCAAAACCAAATACAACCAAGAAAGATGATAGCAGATACAGATCAGACCAGATTTTCAGGTCCACTTCCACCAGAGAATTTAGGAAGTTAAAAACAGATCAACATTTACTCTTTGATTAG 1770 0.3932 MGCVQAKPSEESDEGTSNYRGLNRFKMENGYVPSSDFVAHRRSTGQSQKHVDQIKNSDHHRVYEKQPRKHKVVVDYSVAGKGKRNGELKDSKKQLNKCFEDELVDGWPKWLVDNVPSHGLDGLVPKSAESYKMIDKVGQGTYSNVYKALDRDTGDIVALKKVRFNTSEPESIKFMAREIAILQRLDHPNVVKLKGLATSRMQYSIYLVFDFMPTDLSRIISRPDERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKTGMLQIADFGLANYYSTNQDQPLTNRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFRGIPIMPGRTEVEQLHRIFRLCGTPSQEYWKKLKLSTTFIPPKSYRPSLVESFKDLPPSSLGLLCTLLALDPAFRGSASKALKNQFFFTSPLACDLSGLPAIYKGDDEHIQAKEQIKYMNSKIRRSRTYMERRKNIASNRPIEHTVSSKEVLKSNGEAETYVPSEEPGSATSSTSSSVNQAGIGDHSSLFLSPFMASDQKMSHKIHSHANIGEKNTKNLPPLSKSKPNTTKKDDSRYRSDQIFRSTSTREFRKLKTDQHLLFD* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4357 589 PANTHER CELL DIVISION PROTEIN KINASE 1 556 - -
Psa6g4357 589 MobiDBLite consensus disorder prediction 538 552 - -
Psa6g4357 589 ProSiteProfiles Protein kinase domain profile. 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4357 589 SMART serkin_6 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4357 589 MobiDBLite consensus disorder prediction 460 505 - -
Psa6g4357 589 SUPERFAMILY Protein kinase-like (PK-like) 126 417 IPR011009 -
Psa6g4357 589 MobiDBLite consensus disorder prediction 491 505 - -
Psa6g4357 589 Gene3D Phosphorylase Kinase; domain 1 121 213 - -
Psa6g4357 589 MobiDBLite consensus disorder prediction 553 573 - -
Psa6g4357 589 MobiDBLite consensus disorder prediction 466 480 - -
Psa6g4357 589 MobiDBLite consensus disorder prediction 526 573 - -
Psa6g4357 589 MobiDBLite consensus disorder prediction 1 21 - -
Psa6g4357 589 Gene3D Transferase(Phosphotransferase) domain 1 214 458 - -
Psa6g4357 589 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Psa6g4357 589 Pfam Protein kinase domain 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4357 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Psa6g4357 589 PANTHER CYCLIN-DEPENDENT KINASE 1 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4357 Psa-Chr6 383303383 383308738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4357 126 519 Core Cell Cycle Gene Families AT5G10270 40.049 1.05e-92 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Psa6g4357 Pkinase 6.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4357 K08819 - gmx:100776854 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4357 6 383303383 383308738 Psa6g4357 6 383303383 383308738 ECH