Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4348 ATGACAGATTCAGAAAGAGGAACACCGTCGGTGTTGCCGATGACACCGGACACACCCGGAGGGCCATTATTCTCATCGGTGAGAGTTGATTCTCTTGATCATGATTCCTTTGCAATGGCAAGGTGCAACGTGTGTATGCCTAAAGGTGTTCGAATTCCGAGTGTCACTCTAACTCAGAAGGTTGGAGCAGAGTTTGTAGGAACATTCATACTGATATATGTAGCAACAGCAGGACCAATAGTGAACAACAAATACGAAGGTATAGAAACACTTATAGGAAATGCAGCTTGTGCTGGTTTAACAGTCATGGCAATTATTCTCTCAATTGGTCATATCTCAGGCGCACATCTCAATCCATCGCTCACCATTGCGTTCGCGGCGTTTCGCCATTTTCCGTGGGCGCATGTTCCTGCCTACATTGCAGCACAAGTCTCTGCATCTATCTGCGCTTGTTATGCTCTCAAAGTTGTTTATCGTCCTTTCCTCTCTGGTGGCGTTACTCTCCCTACCGTTACCGTTGGACAAGCTTTTGCAACCGAGTTCATCATCACTTTTATTCTCTTGTTTGTTGCCACTGCTGTTGCTACCGATACTCGCGCAGTTGGTGAAATGGCTGGTATTGCTGTTGGAGCAACAGTTATAGTCAACATTCTGATCTCAGGGCCAACGAGTAGTGGTTCGATGAATCCGGTTCGCTCCTTAGGTCCAGCCGTTGCAACAGGAAACTACAAAAATATCTGGATATACTTCGTGGCGCCAACGCTTGGTGCACTTGCTGGTTCTGGAGCTTATACGCTTGTCAAGCTGCGTGACGACGACGACGAAGCTCAACAGCAGCCGCTACCGGTTAGGAGCTTCAGTCACTAG 867 0.4764 MTDSERGTPSVLPMTPDTPGGPLFSSVRVDSLDHDSFAMARCNVCMPKGVRIPSVTLTQKVGAEFVGTFILIYVATAGPIVNNKYEGIETLIGNAACAGLTVMAIILSIGHISGAHLNPSLTIAFAAFRHFPWAHVPAYIAAQVSASICACYALKVVYRPFLSGGVTLPTVTVGQAFATEFIITFILLFVATAVATDTRAVGEMAGIAVGATVIVNILISGPTSSGSMNPVRSLGPAVATGNYKNIWIYFVAPTLGALAGSGAYTLVKLRDDDDEAQQQPLPVRSFSH* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4348 288 Pfam Major intrinsic protein 54 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa6g4348 288 Gene3D Glycerol uptake facilitator protein. 47 280 IPR023271 -
Psa6g4348 288 PANTHER AQUAPORIN NIP5-1-RELATED 9 279 - -
Psa6g4348 288 PANTHER AQUAPORIN NIP2-1 9 279 IPR034294 -
Psa6g4348 288 SUPERFAMILY Aquaporin-like 55 273 IPR023271 -
Psa6g4348 288 ProSitePatterns MIP family signature. 116 124 IPR022357 -
Psa6g4348 288 PRINTS Major intrinsic protein family signature 59 78 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa6g4348 288 PRINTS Major intrinsic protein family signature 98 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa6g4348 288 PRINTS Major intrinsic protein family signature 135 154 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa6g4348 288 PRINTS Major intrinsic protein family signature 179 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa6g4348 288 PRINTS Major intrinsic protein family signature 210 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa6g4348 288 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4348 Psa-Chr6 383057323 383058885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4348 23 286 Major Intrinsic Protein MIP AT4G10380 67.626 3.27e-128 365