Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4335 ATGGAAAGTACTGTCTCTCATAGTGTCACTACTTTCTTGTTTTTCTTACTGTTTTTTTCTATGGAAGTGAGTTCTATTTCACCTGATGGACAAGCACTTCTTTCTCTTGCAACTTCATCGCCTTCTCTTCTTTCTTCATGGAACCCTTCAACCTCAACACCATGTTCATGGAAAGGCATAACTTGTTCACCACAATCTAGAGTGATTTCACTTTCTATCCCTGACACTTTTCTAAATCTCTCTTCTTTACCACCTCAACTCTCCTCTTTAACAATGCTTCAGCTTCTTAACCTCTCTTCCACGAATCTCTCTGGCTCAATCCCTCCATCTTTTGGTCAACTCTCCCATCTTCAACTCCTTGACCTCTCCTCAAACTCTCTTACTGGTTCAATCCCTAATGAACTTGGAAACTTATATTCTCTTCAGTTCATTTTCTTGAACTCAAACAGATTAACAGGAACCATTCCACAACAGTTTTCTAATCTCACTTCACTTGAAGTTCTTTGTCTTCAAGATAATCTTCTCAATGGTTCAATCCCTTCAGAGCTAGGCTCTTTGAAATCTCTTCAACAGTTTAGGATTGGTGGTAACCCTTATCTCACAGGAGAACTTCCTCCACAGTTAGGACTATTAACCAACCTCACCACATTTGGTGCAGCTGCAACTTCGCTTTCTGGCTCCATTCCTTCCACATTCGGAGACTTGATCAATCTACAAACTCTAGCACTTTATGACACTGAAATTTCTGGTTCAATACCATCAGAACTTGGTTTATGTTCCGAGTTGAGAAATATTTATTTACATATGAACAATCTCACCGGCTCTATCCCTCGTGAAATCGGTAAGTTGCAAAAACTTACTAGTTTGCTTCTTTGGGGAAACACATTGTCTGGTGAAATCCCTTCTGAAATTTCCAACTGTTCATCATTAGTTATATTTGATGTATCTTCTAATGATCTATCTGGCGAAATACCGGGGGATTTCGGGAAGCTAGTTGTTCTCGAACAGCTTCATTTGTCTGACAATTCGCTCACCGGTGAAATACCGTGGCAGTTGAGTAACTGCACAAGCCTTGCAACAGTTCAGTTTGATAAGAATCAGTTATCAGGTACAATTCCTCATCAGGTTGGGAAGTTGAAGGTTCTGCAGAGTTTTTTCTTGTGGGGGAACTTGGTTTCTGGAACTATACCTTCTTCTTTTGGAAACTGTACTGAACTTTATGCACTTGATCTTTCAAGGAATAAGCTAACAGGTTCGATTCCCGAAGAGATTTTCGGTTTGCAGAAGCTGAGTAAGCTTCTGCTTCTTGGAAACTCATTAACAGGAAAGTTGCCAGCAAGTGTTGCAAACTGTCAGTCTTTGGTTAGATTGAGAGTTGGAGAGAATCAGCTTTCAGGAGAGATTCCTAAAGAGATAGGCCAGTTGCAGAATCTTGTTTTTCTTGATCTGTATATGAATCATTTTTCTGGAAGATTACCTGTTGAGATTGCGAATATCAGTGTTCTTGAGCTTTTAGATGTGCATAACAACTACCTCGGCGGAGAAATTCCGTCGCTGATTGGTGAACTTGAAAATTTGGAGCAGCTTGATCTAAGTAAGAATAGTTTGACAGGTGAAATTCCTTCGAGTTTCGGAAACTTGAGTTATCTGAATAAGCTTATTCTCAACAATAATTTGTTAACAGGTTCAATACCGAAATCTGTTAGAAATTTGCAGAAGCTGACTCTATTGGATTTGAGTTATAACAGCTTATCTGGTTGCATACCTCAAGAGATTGGTCATGTTACCAGCTTAACCATAAGTTTGGATTTGAGCTCAAATGCATTCATCGGCGAAATTCCCGATTCAATGTCTGCATTGACACAGTTACAATCACTTGATCTTTCAAGGAACATGCTTCATGGTGGAATTAAGGTTCTTGGTTCGTTAACTAGTCTTACGTCGCTGAATATCTCGTACAACAACTTCTCGGGTCCTATTCCAGTAACTCCATTCTTCAAAACTCTAACTTCAAGTTCATATCTTAAGAACTTTCATCTGTGTCCGTCTATGGATGGTACTACTTGTTCTTCAAGTTTGATTCAGAAAAATGGTTTAAAGTCTGCTAAAACCGTGGCTATGATCACGATTATTCTAGCTTCAGTTACCATAATTGTCATTGCGTCGTGGATTATAGTAACTCGTAGTAATCATCGATACATGGTTGAGAAAGCTTTGAGGATATCAGGTTCCGCGTCAGGAGCCGAGGATTTCTCTTATCCTTGGACTTTCATACCGTTTCAGAAACTGAACTTCAGCATAGATAACATCTTGGATTGCTTGAAAGACGAAAATGTGATCGGAAAAGGTTGTTCTGGCGTTGTTTACAAGGCTGAGATGCCGCACGGAGAAGTGATAGCAGTGAAGAAGCTTTGGAAAACAAACAAAGGAGATGAAATGGTGGATTCTTTTGCTGCTGAGATTCAAATCCTCGGCTACATTCGACATAGGAACATCGTAAGGCTCATAGGTTATTGTTCTAATGGGAGTGTTAAGCTTCTTCTCTATAACTTCATCCAAAATGGTAATCTAAGACAGCTTTTGGAAGGGAATAGGAACTTAGACTGGGAAACTCGATACAAGATTGCGGTTGGTTCCGCGCAAGGTCTAGCTTACCTTCATCATGATTGTGTTCCAACTATTCTTCACAGAGATGTTAAGTGCAATAACATACTTTTAGATTCCAAATTCGAGGCTTATCTCGCAGATTTCGGTCTTGCGAAGCTAATGAATTCGCCAAATTATCATCAAGCAATGTCTAGAGTTGCTGGTTCCTATGGCTATATTGCCCCAGAGTATGGCTACACGATGAACATAACCGAAAAGAGCGACGTGTACAGTTACGGAGTGGTTTTACTCGAGATACTAAGTGGAAGAAGTGCGGTTGAATCTCAACAGATTGGAGATGATGGACAGCACATAGTTGAATGGGTGAAGAAGAAAATGGCAAGCTTCGAACCAGCAGTGTCGATACTAGACACAAAGCTTCAAAGTTTACCGGATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCGATGTTTTGCGTGAATTCTTCGCCGGTTGAACGGCCAACCATGAAGGAAGTTGTTGCATTACTGATGGAAGTGAAGAGTCAGCCTCATGAGGAGATGGGGAAAACCTCACAACCTTTGATCAAGCAGTCTTCAACTCAATGA 3222 0.4029 MESTVSHSVTTFLFFLLFFSMEVSSISPDGQALLSLATSSPSLLSSWNPSTSTPCSWKGITCSPQSRVISLSIPDTFLNLSSLPPQLSSLTMLQLLNLSSTNLSGSIPPSFGQLSHLQLLDLSSNSLTGSIPNELGNLYSLQFIFLNSNRLTGTIPQQFSNLTSLEVLCLQDNLLNGSIPSELGSLKSLQQFRIGGNPYLTGELPPQLGLLTNLTTFGAAATSLSGSIPSTFGDLINLQTLALYDTEISGSIPSELGLCSELRNIYLHMNNLTGSIPREIGKLQKLTSLLLWGNTLSGEIPSEISNCSSLVIFDVSSNDLSGEIPGDFGKLVVLEQLHLSDNSLTGEIPWQLSNCTSLATVQFDKNQLSGTIPHQVGKLKVLQSFFLWGNLVSGTIPSSFGNCTELYALDLSRNKLTGSIPEEIFGLQKLSKLLLLGNSLTGKLPASVANCQSLVRLRVGENQLSGEIPKEIGQLQNLVFLDLYMNHFSGRLPVEIANISVLELLDVHNNYLGGEIPSLIGELENLEQLDLSKNSLTGEIPSSFGNLSYLNKLILNNNLLTGSIPKSVRNLQKLTLLDLSYNSLSGCIPQEIGHVTSLTISLDLSSNAFIGEIPDSMSALTQLQSLDLSRNMLHGGIKVLGSLTSLTSLNISYNNFSGPIPVTPFFKTLTSSSYLKNFHLCPSMDGTTCSSSLIQKNGLKSAKTVAMITIILASVTIIVIASWIIVTRSNHRYMVEKALRISGSASGAEDFSYPWTFIPFQKLNFSIDNILDCLKDENVIGKGCSGVVYKAEMPHGEVIAVKKLWKTNKGDEMVDSFAAEIQILGYIRHRNIVRLIGYCSNGSVKLLLYNFIQNGNLRQLLEGNRNLDWETRYKIAVGSAQGLAYLHHDCVPTILHRDVKCNNILLDSKFEAYLADFGLAKLMNSPNYHQAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVESQQIGDDGQHIVEWVKKKMASFEPAVSILDTKLQSLPDQMVQEMLQTLGIAMFCVNSSPVERPTMKEVVALLMEVKSQPHEEMGKTSQPLIKQSSTQ* 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4335 1073 Gene3D Phosphorylase Kinase; domain 1 751 851 - -
Psa6g4335 1073 PANTHER UNNAMED PRODUCT 7 1070 - -
Psa6g4335 1073 Gene3D Transferase(Phosphotransferase) domain 1 852 1070 - -
Psa6g4335 1073 Gene3D Ribonuclease Inhibitor 275 373 IPR032675 -
Psa6g4335 1073 Gene3D Ribonuclease Inhibitor 467 563 IPR032675 -
Psa6g4335 1073 SMART serkin_6 774 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4335 1073 Gene3D Ribonuclease Inhibitor 374 466 IPR032675 -
Psa6g4335 1073 Gene3D Ribonuclease Inhibitor 179 274 IPR032675 -
Psa6g4335 1073 Gene3D Ribonuclease Inhibitor 29 178 IPR032675 -
Psa6g4335 1073 Gene3D Ribonuclease Inhibitor 564 691 IPR032675 -
Psa6g4335 1073 ProSiteProfiles Protein kinase domain profile. 774 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4335 1073 SUPERFAMILY L domain-like 366 684 - -
Psa6g4335 1073 SUPERFAMILY RNI-like 82 438 - -
Psa6g4335 1073 ProSitePatterns Protein kinases ATP-binding region signature. 780 803 IPR017441 GO:0005524
Psa6g4335 1073 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Psa6g4335 1073 SUPERFAMILY Protein kinase-like (PK-like) 759 1048 IPR011009 -
Psa6g4335 1073 Pfam Protein kinase domain 776 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4335 1073 PRINTS Leucine-rich repeat signature 117 130 - -
Psa6g4335 1073 PRINTS Leucine-rich repeat signature 523 536 - -
Psa6g4335 1073 PANTHER - 7 1070 - -
Psa6g4335 1073 SMART LRR_typ_2 162 186 IPR003591 -
Psa6g4335 1073 SMART LRR_typ_2 90 113 IPR003591 -
Psa6g4335 1073 SMART LRR_typ_2 235 259 IPR003591 -
Psa6g4335 1073 SMART LRR_typ_2 571 595 IPR003591 -
Psa6g4335 1073 SMART LRR_typ_2 138 161 IPR003591 -
Psa6g4335 1073 SMART LRR_typ_2 331 355 IPR003591 -
Psa6g4335 1073 SMART LRR_typ_2 523 546 IPR003591 -
Psa6g4335 1073 SMART LRR_typ_2 114 137 IPR003591 -
Psa6g4335 1073 SMART LRR_typ_2 620 647 IPR003591 -
Psa6g4335 1073 SMART LRR_typ_2 403 427 IPR003591 -
Psa6g4335 1073 SMART LRR_typ_2 283 307 IPR003591 -
Psa6g4335 1073 Pfam Leucine Rich Repeat 525 547 IPR001611 GO:0005515
Psa6g4335 1073 ProSitePatterns Serine/Threonine protein kinases active-site signature. 894 906 IPR008271 GO:0004672|GO:0006468
Psa6g4335 1073 Pfam Leucine rich repeat 382 440 IPR001611 GO:0005515
Psa6g4335 1073 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Psa6g4335 1073 Pfam Leucine rich repeat 93 151 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4335 Psa-Chr6 382410169 382414408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4335 25 1068 Receptor kinase-like Gene Family AT5G56040 45.335 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa6g4335 Pkinase 7.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4335 - - gmx:100804889 1730.69