Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4317 ATGGGCGCGGTTTCGGAATCTGCTTCTGCTGATTGTTTCAGTGAGGTGATGTCGTCGATGCCCGGTTTTCGATTCCATCCCACAGATGAGGAGTTGGTGATGTATTATCTGAAACGGAAGATTTGTGGGAAGAGGTTGAAGTTCAACGTGATTTGTGAAACCGATGTTTACAAGTGGGATCCTGAGGATTTACCTGGGCAATCTTTCCTGAAAACTGGAGATAGACAATGGTTCTTTTTCTGTCATAGAGATAGGAAGTATCCTAATGCTGCAAGGTCTAATCGAGCAACAAGACATGGCTACTGGAAAGCTACAGGAAAAGATCGTAATGTGATATTCAATTCTCGGTCAGTTGGAGTGAAAAAGACACTGGTTTTCTATATCGGCAGAGCTCCTAATGGCGAGCGAACTGATTGGGTTATGCATGAATACACCATGGATGAAGAGGAGTTTAAGAGATGCTGCAATGTCAAGGGCTATTATGCACTTTACAAGGTTTTCAAGAAAAGTGGACCAGGTCCTAAGAACGGTGAACAGTATGGTGCTCCTTTTAAAGAAGAAGAATGGGCAGATGACGACGTTGTAGATTTTAATCTAAATTCAGCTGAGCGGGAGGCTCCAAAGGCTGTTATGGATCCTCCTATTGATCAGTTGCAGCCGTTGTTGGATGATGAAATTGATGAAATCATTAAAGGGATGTTTGATGTTGACCCTGTCCTTGAACAGGATTATGTGAATGGTTATACTAACTTTCCGCAGGTTGTTAATGAAGAAACACAAAGTATGGGCATGGGTCAGTTCTCTGAGGCCATTTTATTTCCTGATCCAAGTGGAAATTTGCAATCTAGCAGTCAACATTATGATGCGCAGCCCAGCTTTGACTTCAATCAATCAGTTACTTCACACTTTCATATTTCTGAAGCACCCGAGGTCACTTCTGCTTCCAACATTCAAAGTGAGGAGGAGCTCGTCTTTTATGAGGACGGCTTCTTGGAAGTTAACGATCTCCTTGATACTGAACCTACAATTTCAAATTCGGAAAATCTTAATGACGATCTCTTTGCGAACCTTCAGTTTGAAGATGGGTTAAGTGAATTTGATACGTACCAAGATGCAGATATGTTTTTTTGTGGCCTGGGGCCTATTTCTGACGAGACAGTTTCACATGCATATATGAATAATGCTGGCAGCAATATTGAAAATCAGAGTCACCAGTTGCTGTCCGATATAGAAGTTGCCAATCAAACTGTTGATGAATTCTGGATGCATGTTGAAAGAAACACCCGCAGTCCAACAGAAGACTTCACTGGTTCTTTCTCTCTAACAAATCCAGGTGTTGTGTGTGACTCTGTCAGCTTTCCTACTGAAAGCACTGAAAATCGAAGAAGCACTATGGAAGACGTCGCTACTACAAGTAGATTATCTTCTGCTCTTTGGGCTTTTGTTGATTCAATACCTACCACTCCTGCATCAGCTGCTGAAAATCCTTTGGTGAATCGGGCTTTGAATCGAATGTCTAGCTTCAGCATGATGAAGATGAAACCAACCGACACTGCAGGTATTGATACTACAACTATGAAGAGAGCAGGCAGGAAGGGAGTCTCCTTCCTTTTCTTCCCTATTCTTATTGCTTTATGTGCTTTCTTGTGGGTTTCTATTGGAAATTTAAGACTATTAGGGACATACGTCTCTCCTTGA 1698 0.4199 MGAVSESASADCFSEVMSSMPGFRFHPTDEELVMYYLKRKICGKRLKFNVICETDVYKWDPEDLPGQSFLKTGDRQWFFFCHRDRKYPNAARSNRATRHGYWKATGKDRNVIFNSRSVGVKKTLVFYIGRAPNGERTDWVMHEYTMDEEEFKRCCNVKGYYALYKVFKKSGPGPKNGEQYGAPFKEEEWADDDVVDFNLNSAEREAPKAVMDPPIDQLQPLLDDEIDEIIKGMFDVDPVLEQDYVNGYTNFPQVVNEETQSMGMGQFSEAILFPDPSGNLQSSSQHYDAQPSFDFNQSVTSHFHISEAPEVTSASNIQSEEELVFYEDGFLEVNDLLDTEPTISNSENLNDDLFANLQFEDGLSEFDTYQDADMFFCGLGPISDETVSHAYMNNAGSNIENQSHQLLSDIEVANQTVDEFWMHVERNTRSPTEDFTGSFSLTNPGVVCDSVSFPTESTENRRSTMEDVATTSRLSSALWAFVDSIPTTPASAAENPLVNRALNRMSSFSMMKMKPTDTAGIDTTTMKRAGRKGVSFLFFPILIALCAFLWVSIGNLRLLGTYVSP* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4317 565 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 15 564 - -
Psa6g4317 565 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Psa6g4317 565 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Psa6g4317 565 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Psa6g4317 565 PANTHER NAC TRANSCRIPTION FACTORS 2 15 564 - -
Psa6g4317 565 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4317 Psa-Chr6 381675809 381680762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4317 4 560 NAC Transcription Factor Family AT1G34190 43.655 1.78e-140 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa6g4317 NAM 7.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4317 - - mtr:MTR_1g097300 943.34