Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4307 ATGAATCTTATTTCCCCGTTTGAGGGCTACGGCGAGAACGTGCCTCCGCCGGTAAGTCTTGGTGCTGAAACGAACTTCATGAGGATGTTGAAGAATAACATTGAGAGATGTAAGTATGTGAAACCTACTTCGCGTTCACGTTACGCGATCCATTGCCTGTTGTCGGGAGAGACCTTATGGCCTGTGCTTCCAGATGGTCTGTTAACGGCGGCGTTTTGTTTTCCGATTATATCTGGGATTATTGAAAGATCGTTTAGGTTCTGGGGTGTCGGCTTGCCACATGCGGTGGTTCCGAATGTTGCGTACCCACGCACTCATCTTGTCTCCAAACTAAGGGAGTTATTCATGCCAGCAACAAGTTGGCTTATCAAACAGGCAGTGAGAATGCGTTTGCTTACGGGTGCTCCTATTGGTCAACAGCTACGTGTTTTGGAGAGAGGTGTTGATATTTTTGGTGCCAACTCCTGGGCGTTTGGTGATATGATTGAAGAGAAAGGTTTCTTGAAGAAGATTAAGTATCTTGCTTTGGATGAGGCTGATCGGATGCTGGACATGGGTTTTGAGCATCAGATTCGCAACATTGTTCAGCAGATAACATGCCTGTCGGACTAG 612 0.4673 MNLISPFEGYGENVPPPVSLGAETNFMRMLKNNIERCKYVKPTSRSRYAIHCLLSGETLWPVLPDGLLTAAFCFPIISGIIERSFRFWGVGLPHAVVPNVAYPRTHLVSKLRELFMPATSWLIKQAVRMRLLTGAPIGQQLRVLERGVDIFGANSWAFGDMIEEKGFLKKIKYLALDEADRMLDMGFEHQIRNIVQQITCLSD* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4307 203 Pfam DEAD/DEAH box helicase 69 200 IPR011545 GO:0003676|GO:0005524
Psa6g4307 203 Gene3D - 5 202 IPR027417 -
Psa6g4307 203 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 6 198 - -
Psa6g4307 203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 199 IPR027417 -
Psa6g4307 203 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-LIKE ISOFORM X1 6 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4307 Psa-Chr6 381405819 381406650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4307 134 194 Eukaryotic Initiation Factors Gene Family AT3G19760 37.097 2.77e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4307 K11594 - ini:109152250 149.443