Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4292 ATGGAGCCTCTCTCTTCCACCAAACAAATTAATAATAACAATAATAATCTCGCCAAGCCTTCTTCTCTCCATGTCGAAACCCAACCTCTTGAACCAAGTCCCCTCCGTAAGATCATGGTGGTTGCATCCATCGCAGCCGGTGTTCAATTCGGCTGGGCCCTACAACTCTCACTTTTAACTCCTTATGTCCAGCTGCTCGGTATCCATCATACCTGGGCCGCTTACATTTGGCTCTGCGGCCCAATTTCCGGTATGCTTGTCCAGCCTGTAGTCGGTTACCACAGCGACCGTTGCACTTCCCGCTTCGGTCGTCGTCGACCGTTTATAGCCGCCGGCTCAATCGCCGTAGCTATCGCTGTCTTCTTAATCGGCTACGCCGCTGATCTCGGCCATTCCTTTGGCGACAACCTCGACAAAAAAGTCCGTCCCCGAGCAATTGGAATCTTCGTCGTTGGATTCTGGATTCTCGACGTCGCTAACAATATGCTCCAGGGACCATGCCGTGCACTTCTCGGCGACCTCTGCGCCGGTAACCAGCGAAAAACGAGAAACGCAAACGCGTTTTTCTCGTTCTTCATGGCGGTTGGTAACGTCCTCGGCTACGCCGCCGGTGCTTACAGCAAACTCTATCACGTGTTTCCGTTCACCAAAACGGAAGCATGTAATGTTTACTGCGCAAACCTGAAAAGCTGTTTCTTCCTCTCAATCGCGCTTTTAACGGTTTTAGCCACCGCTGCACTGATCTACGTGAAGGAAACTCCACTAATAGCGGAGAAAGCCGTTGTGACGGCGGAAGACGGTGGTTCAAACGGTGGCATGCCGTGTTTTGGGCAGTTATCCGGTGCTTTCAAGGAGCTAAAGAGGCCTATGTGGATCTTATTATTGGTGACGTGTCTGAACTGGATTGCGTGGTTTCCTTTCTTGTTGTTTGATACTGATTGGATGGGGAAAGAGGTTTATGGAGGAACGGTTGGGGAAGGTCATGCGTATGATATGGGTGTGCGCGCGGGGGCTTTAGGACTCATGTTAAACTCCGTCGTTTTGGGTGCAACGTCACTGGGTGTTGATATCTTGGCGCGTGGAGTTGGGGGCGTGAAGAGGTTGTGGGGAATTGTTAACTTCTTGCTCGCAATTTGTTTGGGTTTGACCGTTTTGGTTACTAAATTAGCCCAACATTCGCGACAATACGCCCCCGGTACCGGCGGTCTCCAAGACCCTCTTCCACCTTCCGGCGGTATCAAGGCCGGCGCGTTAACTCTCTTCTCCGTTCTCGGAATTCCACTCGCGATTACTTACAGCATACCCTTTGCTCTAGCATCTATATTCTCCAGCACTTCAGGGGCAGGCCAAGGGTTATCTCTAGGAGTTCTTAATCTTGCAATTGTCATACCACAGATGTTTGTCTCTGTTTTGAGTGGACCATGGGACGCTCTGTTTGGAGGTGGTAACCTGCCGGCGTTTGTGGTCGGTGCGGTGGCGGCTCTAGCAAGTGGCATACTATCCATGATCTTACTGCCATCTCCACCACCAGATATGGCCAAGTCTGTATCAGCTACTGGAGGAGGCTTTCATTAA 1575 0.5111 MEPLSSTKQINNNNNNLAKPSSLHVETQPLEPSPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGIHHTWAAYIWLCGPISGMLVQPVVGYHSDRCTSRFGRRRPFIAAGSIAVAIAVFLIGYAADLGHSFGDNLDKKVRPRAIGIFVVGFWILDVANNMLQGPCRALLGDLCAGNQRKTRNANAFFSFFMAVGNVLGYAAGAYSKLYHVFPFTKTEACNVYCANLKSCFFLSIALLTVLATAALIYVKETPLIAEKAVVTAEDGGSNGGMPCFGQLSGAFKELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGTVGEGHAYDMGVRAGALGLMLNSVVLGATSLGVDILARGVGGVKRLWGIVNFLLAICLGLTVLVTKLAQHSRQYAPGTGGLQDPLPPSGGIKAGALTLFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMFVSVLSGPWDALFGGGNLPAFVVGAVAALASGILSMILLPSPPPDMAKSVSATGGGFH* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4292 524 MobiDBLite consensus disorder prediction 1 24 - -
Psa6g4292 524 Gene3D MFS general substrate transporter like domains 36 258 IPR036259 -
Psa6g4292 524 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 24 516 - -
Psa6g4292 524 CDD MFS_SLC45_SUC 38 500 - -
Psa6g4292 524 Pfam MFS/sugar transport protein 46 303 - -
Psa6g4292 524 PANTHER SUGAR TRANSPORTER 24 516 - -
Psa6g4292 524 TIGRFAM GPH_sucrose: sucrose/H+ symporter 34 510 IPR005989 GO:0005887|GO:0008515|GO:0015770
Psa6g4292 524 SUPERFAMILY MFS general substrate transporter 37 510 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4292 Psa-Chr6 380584502 380588038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4292 21 524 Sucrose Transporter Gene Family AT1G22710 68.164 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4292 K15378 - gmx:547679 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4292 6 380584502 380588038 Psa6g4292 6 380584502 380588038 ECH