Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4269 ATGGGAGATACCAACTTTACTAAGAAAGACATAGAAACAGAAGACAGTGATTGTCTTTCCGCAATGGTACTTACGACCAATCTTGTTTATCCAGCTGTGTTGAATGCTGCTATTGATCTCAATCTATTTGAGATTATTTCTAACGCAACACCCCCCGGTGCTTTCATCTCCCATCACAGATTGCTTCTCAATTACATCCTCAACCAGCATTCGGACTTGTCTAACAGGCTCGACGAATGTTGCGTTTGCTCACTAGTTTTCCTTCTCACTTCTTCCACTCGAACCGCGAGGACGGTAGTATCGAGAGAGTTTACGGACTCACGTCGCGTCGGTAAATACCTTGTCCCCGACGAAAGTGAGGCTACCTGGCTTCATTCACTACATTTCTATGTTATCCGGCATTGTTACAAGTTTGAGATGAAAAGAATGCTTGAAATATACAGGTGGATTGGACGGAATTATTCAACACTGGTTTGTTGTGGAGGTGGAAGGGACAAAAGTTCTGAAAATGATAATATCCAAATATCCACATCTAGAGGGAACTCAACGTTGATCTTCCACAGCAAATGTCAGAAAGCATTGTCAGCAAATGGAAAAGTGATTGTTGTGGAATTCATATTGCCAGAAGAACCAACCTCAACTCAAGAATCAAAACTTGTTTCAACTATTGACAATCTCATGTTTATCACTGTTGGTGGAAGGGAAAGAACTGAGAAACAGTATCACAATTTGGGAAAACTCTCTGGATTTTCCAAAGTCCAAGTTGCATGCCGCGCTTTCTCTTGCTTAGGAGTCATTGAGTTTTACAAATGA 813 0.4133 MGDTNFTKKDIETEDSDCLSAMVLTTNLVYPAVLNAAIDLNLFEIISNATPPGAFISHHRLLLNYILNQHSDLSNRLDECCVCSLVFLLTSSTRTARTVVSREFTDSRRVGKYLVPDESEATWLHSLHFYVIRHCYKFEMKRMLEIYRWIGRNYSTLVCCGGGRDKSSENDNIQISTSRGNSTLIFHSKCQKALSANGKVIVVEFILPEEPTSTQESKLVSTIDNLMFITVGGRERTEKQYHNLGKLSGFSKVQVACRAFSCLGVIEFYK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4269 270 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 185 268 IPR029063 -
Psa6g4269 270 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 3 131 - -
Psa6g4269 270 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 183 270 - -
Psa6g4269 270 Pfam O-methyltransferase domain 188 251 IPR001077 GO:0008171
Psa6g4269 270 PANTHER O-METHYLTRANSFERASE 3 131 IPR016461 GO:0008168
Psa6g4269 270 PANTHER O-METHYLTRANSFERASE 183 270 IPR016461 GO:0008168
Psa6g4269 270 SUPERFAMILY "Winged helix" DNA-binding domain 14 64 IPR036390 -
Psa6g4269 270 Gene3D Vaccinia Virus protein VP39 188 259 IPR029063 -
Psa6g4269 270 Gene3D - 2 113 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4269 Psa-Chr6 378484786 378485966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4269 186 270 Monolignol Biosynthesis Gene Families AT5G54160 43.023 4.41e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4269 - - ag:AAB48059 225.713