Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa6g4268 | ATGGGAGATTCCAACCTTACAAACCAATTTAGTGTTGCCTCTGGCATAGAAACAGAAGACAGTGATTGTCTTTCCGCAATGATTGCTTCTCAATTGCCATCCTCAAACCAACCTTCGGACTTGTCTAACAGGCTCGACCGAATGTTGCGTTTGCTCACTAGTTATTCCCTCTCACTTCTTCTTACTCGGACTGCCGAGGACGGCAGTATCGAGAGAGTTTACGGACTCACGTCGGTCGGTAAATACCTGTCCCCGACGAAAGTAGAGGCTACCTGGCTTCATTCACTACATTTCTATGTTATCGGCATTGTTACAAGTTTGGTTATTGAAAATGCAGCACCAATTCCAGTATCGAACATGTTGGAGGAGACATGTTTGAAAGTGTTCCAGAGGAAAGCATTGTCAGCAAATGGAAAAGTGATTGTTGTGGAATTCATATTGCCAGAAGAACCAACCTCAACTCAAGAATCAAAACTTGTTTCGACTATTGACAATCTCATGTTTATCACTGTTGGTGGAAGGGAAAGAACTGAGAAACAGTATCACAATTTGGGAAAACTCTCTGGATTTTCCAAAGTCCAAGTTGCATGCCGTGCTTTCTCTTGCTTAGGAGTCATTGAGTTTTATAAATAA | 633 | 0.4218 | MGDSNLTNQFSVASGIETEDSDCLSAMIASQLPSSNQPSDLSNRLDRMLRLLTSYSLSLLLTRTAEDGSIERVYGLTSVGKYLSPTKVEATWLHSLHFYVIGIVTSLVIENAAPIPVSNMLEETCLKVFQRKALSANGKVIVVEFILPEEPTSTQESKLVSTIDNLMFITVGGRERTEKQYHNLGKLSGFSKVQVACRAFSCLGVIEFYK* | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa6g4268 | 210 | Pfam | O-methyltransferase domain | 123 | 191 | IPR001077 | GO:0008171 | |
Psa6g4268 | 210 | SUPERFAMILY | "Winged helix" DNA-binding domain | 27 | 85 | IPR036390 | - | |
Psa6g4268 | 210 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 121 | 208 | IPR029063 | - | |
Psa6g4268 | 210 | PANTHER | CAFFEIC ACID O-METHYLTRANSFERASE | 118 | 210 | - | - | |
Psa6g4268 | 210 | PANTHER | CAFFEIC ACID O-METHYLTRANSFERASE | 24 | 98 | - | - | |
Psa6g4268 | 210 | PANTHER | O-METHYLTRANSFERASE | 24 | 98 | IPR016461 | GO:0008168 | |
Psa6g4268 | 210 | PANTHER | O-METHYLTRANSFERASE | 118 | 210 | IPR016461 | GO:0008168 | |
Psa6g4268 | 210 | Gene3D | - | 9 | 83 | IPR036388 | - | |
Psa6g4268 | 210 | Gene3D | Vaccinia Virus protein VP39 | 122 | 199 | IPR029063 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa6g4268 | Psa-Chr6 | 378373547 | 378374725 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa6g4268 | 28 | 84 | Monolignol Biosynthesis Gene Families | AT5G54160 | 47.368 | 8.19e-08 | 49.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa6g4268 | - | - | gmx:100787536 | 137.887 |