Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4268 ATGGGAGATTCCAACCTTACAAACCAATTTAGTGTTGCCTCTGGCATAGAAACAGAAGACAGTGATTGTCTTTCCGCAATGATTGCTTCTCAATTGCCATCCTCAAACCAACCTTCGGACTTGTCTAACAGGCTCGACCGAATGTTGCGTTTGCTCACTAGTTATTCCCTCTCACTTCTTCTTACTCGGACTGCCGAGGACGGCAGTATCGAGAGAGTTTACGGACTCACGTCGGTCGGTAAATACCTGTCCCCGACGAAAGTAGAGGCTACCTGGCTTCATTCACTACATTTCTATGTTATCGGCATTGTTACAAGTTTGGTTATTGAAAATGCAGCACCAATTCCAGTATCGAACATGTTGGAGGAGACATGTTTGAAAGTGTTCCAGAGGAAAGCATTGTCAGCAAATGGAAAAGTGATTGTTGTGGAATTCATATTGCCAGAAGAACCAACCTCAACTCAAGAATCAAAACTTGTTTCGACTATTGACAATCTCATGTTTATCACTGTTGGTGGAAGGGAAAGAACTGAGAAACAGTATCACAATTTGGGAAAACTCTCTGGATTTTCCAAAGTCCAAGTTGCATGCCGTGCTTTCTCTTGCTTAGGAGTCATTGAGTTTTATAAATAA 633 0.4218 MGDSNLTNQFSVASGIETEDSDCLSAMIASQLPSSNQPSDLSNRLDRMLRLLTSYSLSLLLTRTAEDGSIERVYGLTSVGKYLSPTKVEATWLHSLHFYVIGIVTSLVIENAAPIPVSNMLEETCLKVFQRKALSANGKVIVVEFILPEEPTSTQESKLVSTIDNLMFITVGGRERTEKQYHNLGKLSGFSKVQVACRAFSCLGVIEFYK* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4268 210 Pfam O-methyltransferase domain 123 191 IPR001077 GO:0008171
Psa6g4268 210 SUPERFAMILY "Winged helix" DNA-binding domain 27 85 IPR036390 -
Psa6g4268 210 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 208 IPR029063 -
Psa6g4268 210 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 118 210 - -
Psa6g4268 210 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 24 98 - -
Psa6g4268 210 PANTHER O-METHYLTRANSFERASE 24 98 IPR016461 GO:0008168
Psa6g4268 210 PANTHER O-METHYLTRANSFERASE 118 210 IPR016461 GO:0008168
Psa6g4268 210 Gene3D - 9 83 IPR036388 -
Psa6g4268 210 Gene3D Vaccinia Virus protein VP39 122 199 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4268 Psa-Chr6 378373547 378374725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4268 28 84 Monolignol Biosynthesis Gene Families AT5G54160 47.368 8.19e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4268 - - gmx:100787536 137.887