Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4266 ATGCCAACAACACCATCAACAACATCAACGTTTGATGGCCTAGAAACTCCAAACGCAAACTCATCCAACACTCATGCTTCTCCCAAACAAAGCCCCCGAGAATCGCGTGACCTTCCTCCTTTACTCTCTTCTACTTACCCAATCACTCTTAAGTTCATGGACGTGGGATACAGATTAAAGATAGAGAGCAAAAAAGGAGGCTGCATCAAGAATTTCTTTACCGCGCTTGAATCACCACCGTCTGATCAAAGATCAACGCAAGAGCGAATCATTCTTAACAGTGTAACGGGAATAGCTTACCCAGGAGAGATCTTAGCGATTCTAGGCCCATCTGGAAGCGGAAAATCGACGCTCCTAAACTCACTCGCAGGGAGACTTCATGGAAACGGTCTCACTGGAACTATCCTCGCTAACTCATCGAAACTCAACAGAACGATTCTCCGTCGAACCGGGTTCGTTACGCAAGACGATATTCTCTACCCTCACTTAACGGTTCGCGAGACATTGGTTTTCTGCTCCATGCTGCGTCTCCCGAGGACGCTTTCGCGGGAGACGAAGGTGGCGGCGGCGGAGTCAGTGATCGTGGAGTTAGGTTTAAGCAAATGCGAGAACACTATCATTGGGAACAGTTTCATTCGCGGTGTTTCTGGTGGAGAGAGGAAGCGCGTGAGTATCGCTCACGAGATGTTGGTGGATCCGGCGCTTTTGATCTTGGATGAGCCTACGTCTGGATTGGACTCCACGGCGGCGCACCGCCTATTGTCGACGCTGGGTTCCTTGGCGAGGAAAGGGAAGACGGTGGTTACGTCAGTGCACCAGCCGTCAAGTCGTGTCTACCAGATGTTTGATAAAGTGCTCGTGTTGTCAGAAGGTAACTGTATGTACTACGGCAAAGGAACCGATGCCATGAGGTATTTCGAGTCGGTTGGGTTCGCGCCATCTTTCCCGGTTAATCCGGCGGATTTTCTGCTCGATCTCGCTAACGGTGTTTGCCATGTAGATGGTGTAAGTGAAAAAGATCGACCAAACATAAAGCAAAATTTAATTCATTCATACAACAGAGAACTGGGTCCAAAGGTAAAATCTCTTTGCATGGACACAACAAATGTTTCAATAAAAGGAAGTAACCCTGTAAGAAGCAACTCTTCAAAAGAACGTAGATATAATGACAGAGTTAGCATCTTTGATTGGTTTTACCAATTCAGTATTCTACTCCAGAGAAGCCTCAAAGAAAGAAAATATGAATCATTCAACATACTGAGAGTTTCTCAAGTTGTTGCTGCTGCATTACTAGCTGGTTTAATGTGGTGGCATTCAGACTATATGAACATTCAAGATAGGCTTGGATTACTCTTCTTCATTTCAATCTTTTGGGGTGTATTCCCATCTTTCAACTCTGTGTTTGCATTCCCTCAAGAGCGTGCAATCTTTGTAAAAGAGAGAGCTTCTGGTATGTACACATTATCATCCTATTTCATGGCTAGAATTGTGGGTGACCTACCAATGGAGCTTATTCTTCCAACAATTTTCCTCGTTATTACATACTGGATGGGTGGATTGAAGCCTGATTTGTTGTCTTTTCTCTTGACATTGATGGTTGTTCTTTTATTCGTTCTTGTATCACAAGGTCTTGGACTTGCTTTAGGTGCTGCAATAATGGATGCTAAACAAGCTTCCACAGTTGCAGCAGTTACAATGCTAGCATTTGTTTTAACAGGTGGATACTATGTTCATAAGGTTCCATCTTGTGTTGCTTGGATCAAATATATATCCACAACATTCTATAGTTACAGGCTTTTGACTAGAATTCAATATGGTGATGGCAAGAAAATTGCATATCTATTGGGCTGCAATCATGATAGTAGTACTAGTGATGGAGCTAACTGCAAATTTCTTGATGAAGATGTGGTGGGTCAAATGGGCCCAATGGGAAGCATTGGAGTGTTGTTTTTCATGTTTGTGTTTTACAGATTATTGGCTTACCTTGCCTTGAGACGTATCAAAAATTGA 2010 0.4368 MPTTPSTTSTFDGLETPNANSSNTHASPKQSPRESRDLPPLLSSTYPITLKFMDVGYRLKIESKKGGCIKNFFTALESPPSDQRSTQERIILNSVTGIAYPGEILAILGPSGSGKSTLLNSLAGRLHGNGLTGTILANSSKLNRTILRRTGFVTQDDILYPHLTVRETLVFCSMLRLPRTLSRETKVAAAESVIVELGLSKCENTIIGNSFIRGVSGGERKRVSIAHEMLVDPALLILDEPTSGLDSTAAHRLLSTLGSLARKGKTVVTSVHQPSSRVYQMFDKVLVLSEGNCMYYGKGTDAMRYFESVGFAPSFPVNPADFLLDLANGVCHVDGVSEKDRPNIKQNLIHSYNRELGPKVKSLCMDTTNVSIKGSNPVRSNSSKERRYNDRVSIFDWFYQFSILLQRSLKERKYESFNILRVSQVVAAALLAGLMWWHSDYMNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLVITYWMGGLKPDLLSFLLTLMVVLLFVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCVAWIKYISTTFYSYRLLTRIQYGDGKKIAYLLGCNHDSSTSDGANCKFLDEDVVGQMGPMGSIGVLFFMFVFYRLLAYLALRRIKN* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4266 669 MobiDBLite consensus disorder prediction 1 40 - -
Psa6g4266 669 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 20 667 - -
Psa6g4266 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 308 IPR027417 -
Psa6g4266 669 Pfam ABC-2 type transporter 272 369 IPR043926 GO:0140359
Psa6g4266 669 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 50 315 IPR003439 GO:0005524
Psa6g4266 669 Gene3D - 83 309 IPR027417 -
Psa6g4266 669 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 667 - -
Psa6g4266 669 Pfam ABC-2 type transporter 399 604 IPR013525 GO:0016020|GO:0140359
Psa6g4266 669 Pfam ABC transporter 93 243 IPR003439 GO:0005524
Psa6g4266 669 MobiDBLite consensus disorder prediction 1 29 - -
Psa6g4266 669 SMART AAA_5 101 292 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4266 Psa-Chr6 378048092 378054915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4266 72 297 Calmodulin-binding Proteins AT2G36910 27.843 9.14e-15 76.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4266 6 378048092 378054915 Psa6g4266 6 378048092 378054915 ECH