LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa6g4261	ATGGAACAAACCATCAAAACCCATCATCTTCCCATTCACACCATTCTATCAAACTCTCCTCCATCTTCCTCTTCTTCACCACCACCTCCTTTACAATCTCCCACACCTTTTCCTTCATTGCTTTCTCAATACTCTCCTCCCTCCGCCACCGCCGCAGCTCCTCCTCAACCTCCTTCTCCTCCGCCACCAATCGTCGTTAGCCCTTGTGCTGCCTGCAAGATCCTTCGTCGCAGATGCGTCGAGAAATGCGTCTTAGCTCCCTATTTTCCTCCCACCGATCCACTCAAGTTCACTATTGCTCATAGAGTCTTTGGAGCTAGCAACATCATTAAGTTCTTGCAGGAACTAGCTGAACCTCAAAGAGCAGATGCAGTGAGCAGCATGGTATATGAAGCAAATGCAAGAATAAGGGACCCAGTTTATGGTTGTGCAGGTGCAATATGTCAACTTCAAAAGCAAGTTAGTGAGCTACAAACACAGCTAGCCAAAGCACAAGCTGAGTTAGTCAACATGCATTGCCAACAAGCAAATCTAGTAGCACTAATTTGCATGGAAATGAGTACTCAGTCATCACCATCATCCTCATCACAAGACCATAACATGATGATAATCAATCAACCTCAACCTCATCTTGACATGAGTTGCTTCTTAGAAGACAACAATTTTGGCTCAGCTTGGGAGCCTCTATGGACATGA	696	0.4555	MEQTIKTHHLPIHTILSNSPPSSSSSPPPPLQSPTPFPSLLSQYSPPSATAAAPPQPPSPPPPIVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELAEPQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQTQLAKAQAELVNMHCQQANLVALICMEMSTQSSPSSSSQDHNMMIINQPQPHLDMSCFLEDNNFGSAWEPLWT*	232

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa6g4261	231	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 1	55	228	-	-
	Psa6g4261	231	Coils	Coil	147	174	-	-
	Psa6g4261	231	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	55	228	-	-
	Psa6g4261	231	Pfam	Lateral organ boundaries (LOB) domain	68	165	IPR004883	-
	Psa6g4261	231	MobiDBLite	consensus disorder prediction	1	59	-	-
	Psa6g4261	231	MobiDBLite	consensus disorder prediction	22	36	-	-
	Psa6g4261	231	ProSiteProfiles	LOB domain profile.	67	168	IPR004883	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa6g4261	Psa-Chr6	376808317	376810460	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa6g4261	64	231	AS2 family	AT1G07900	64.740	1.54e-71	214

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Psa6g4261		LOB	2.9e-40	No_clan