Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4261 ATGGAACAAACCATCAAAACCCATCATCTTCCCATTCACACCATTCTATCAAACTCTCCTCCATCTTCCTCTTCTTCACCACCACCTCCTTTACAATCTCCCACACCTTTTCCTTCATTGCTTTCTCAATACTCTCCTCCCTCCGCCACCGCCGCAGCTCCTCCTCAACCTCCTTCTCCTCCGCCACCAATCGTCGTTAGCCCTTGTGCTGCCTGCAAGATCCTTCGTCGCAGATGCGTCGAGAAATGCGTCTTAGCTCCCTATTTTCCTCCCACCGATCCACTCAAGTTCACTATTGCTCATAGAGTCTTTGGAGCTAGCAACATCATTAAGTTCTTGCAGGAACTAGCTGAACCTCAAAGAGCAGATGCAGTGAGCAGCATGGTATATGAAGCAAATGCAAGAATAAGGGACCCAGTTTATGGTTGTGCAGGTGCAATATGTCAACTTCAAAAGCAAGTTAGTGAGCTACAAACACAGCTAGCCAAAGCACAAGCTGAGTTAGTCAACATGCATTGCCAACAAGCAAATCTAGTAGCACTAATTTGCATGGAAATGAGTACTCAGTCATCACCATCATCCTCATCACAAGACCATAACATGATGATAATCAATCAACCTCAACCTCATCTTGACATGAGTTGCTTCTTAGAAGACAACAATTTTGGCTCAGCTTGGGAGCCTCTATGGACATGA 696 0.4555 MEQTIKTHHLPIHTILSNSPPSSSSSPPPPLQSPTPFPSLLSQYSPPSATAAAPPQPPSPPPPIVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELAEPQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQTQLAKAQAELVNMHCQQANLVALICMEMSTQSSPSSSSQDHNMMIINQPQPHLDMSCFLEDNNFGSAWEPLWT* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4261 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 55 228 - -
Psa6g4261 231 Coils Coil 147 174 - -
Psa6g4261 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 55 228 - -
Psa6g4261 231 Pfam Lateral organ boundaries (LOB) domain 68 165 IPR004883 -
Psa6g4261 231 MobiDBLite consensus disorder prediction 1 59 - -
Psa6g4261 231 MobiDBLite consensus disorder prediction 22 36 - -
Psa6g4261 231 ProSiteProfiles LOB domain profile. 67 168 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4261 Psa-Chr6 376808317 376810460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4261 64 231 AS2 family AT1G07900 64.740 1.54e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Psa6g4261 LOB 2.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4261 - - gmx:100806667 299.286