Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4250 ATGTCTGGCAATACAGGTTGTACCGTTTACATAGGCAATCTGGATGAGAGGGTTACAGACAGGGTCTTGTATGATATATTAATTCAAGCTGGACGAGTGGTGGACTTGCACATTCCTAAAGATAAGGAAACTGATAAACCTAAAGGCTTTGCCTTTGCAGAGTTTGAAACTGAGGAGATTGCAGACTATGCTGTCAAACTTTTCTCAGGCCTTGTAACACTGTACAAACGGACACTGAAGTTTGCGTCTGCTAATAAGGACAAAAGCATCCCTAATAGTTCTCCAGCTACGACACCCACTTCAAATTCTTCTCAACGACCCAGGCCTTACCCTGTGCAAATAACTAGTTCAGAAAATTTTCAGCATTCCCCTAAGCAAGCAATACCTAGCCGATTCTCAGATCATGCGATAAATTATTCTCAAGCTCCACCTCCTCACCGCGTAACTGATCAATCTAGTGGGTATGGATCTCACTACAGTGGCAACCAGTATGATTACAGTCGGAGAGCTTTTGGGGAGGCATTGGATAGCGCTAACGGTTGCAGCGGTTCTAGGTCACGCCGCGCTGATGGAATTAGCTCGGTCTCTTATTCACCTCACTAA 603 0.4478 MSGNTGCTVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKETDKPKGFAFAEFETEEIADYAVKLFSGLVTLYKRTLKFASANKDKSIPNSSPATTPTSNSSQRPRPYPVQITSSENFQHSPKQAIPSRFSDHAINYSQAPPPHRVTDQSSGYGSHYSGNQYDYSRRAFGEALDSANGCSGSRSRRADGISSVSYSPH* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4250 200 PANTHER OS01G0876500 PROTEIN 1 197 - -
Psa6g4250 200 SUPERFAMILY RNA-binding domain, RBD 4 86 IPR035979 GO:0003676
Psa6g4250 200 Gene3D - 2 93 IPR012677 -
Psa6g4250 200 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 197 - -
Psa6g4250 200 MobiDBLite consensus disorder prediction 177 200 - -
Psa6g4250 200 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Psa6g4250 200 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 79 IPR000504 GO:0003723
Psa6g4250 200 MobiDBLite consensus disorder prediction 88 108 - -
Psa6g4250 200 MobiDBLite consensus disorder prediction 179 200 - -
Psa6g4250 200 SMART rrm1_1 8 82 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4250 3 90 Eukaryotic Initiation Factors Gene Family AT4G34110 29.545 1.12e-06 46.6