Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4223 ATGCCGCCGGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAATCGGTTGGGTCTGTGGCGAGATGGAGAGATTCTTCTCATCACCGAGACTTGAATCGATGGGGATCCACCGAGTTTCGCAGACCGCCTGGTCATGGTAAGCAGGGTGGTTGGCATATGTTTTCTGAAGAACCTGGTCGTGGTTACGGGGTTTCTCGGTCTGGTGACAAGATGCTGGAAGAAGATAGTCGGCCATCGGTTTCACGTGATGGTAAATACGGCAGGAGCAGTAAGGACAATAGAGGTCCCTCTGGCCAGAGAGATTGGAGAGGTCATTCGTGGGAAGCCACCAATGGCTCCCCAAATTTATCCAGGAGATCATCAGATATGAATAATGACCGGAGGTCAGTTGATGATTCTACAACATATTCCTCTCATCCACATTCTGATTCTGTGAACACTTGGAAACAGCAACACTTGAAAGACCAGCATGATAAGATGGGTGGTGTCAATGAGTTAGGAGCAGCACCAAGATGTGATAAAGAGAATTCTTCAATTGACTGGAAGCCACTAAAATGGAACCGATCTGGAAGCTTGTCTTCTCGAGGCTCAGGTTTTAGCCACTCAAGTTGCTCACGGAGCATGGCAGGGGCAGATTCCAATGAAGCAAAGCCTGATTTGAAACCCAAAAATATCACTGCTATTGAGTTGCATTCAGGGGAAGGCACTGCATGTGTGACATCTTCTATGCCATCTGAAGATACAACTTCTAGAAAGAAGAAGCCTAGGCTAAATTGGGGTGAGGGGCTTGCAAAGTACGAGAAGAAAAAAGTTGAGCGACCTGATCCAGGAGCAAACAAAGATGGGTCAGTCTCGTATGCTGGTAATATGGAACCTTGTAATTTCATCAGCTCCAACTTAGTAGATAAAAGCCCAAAAGTTACAGAATTTTCAGACTGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGCGTGGATGATAAATTATTGGGAAAAACTGCAAATGCAGACAATAATTTAAGTAATTTGAGTGATTCACCTGCTCCTGGGTTCCAGAATCACCTGCAGAAGTTTTGTCTTAGCCTTGATAACTTGGATATTGACTCCTTGAATAATTTGGGCTCTTCAATTGTTGAGTTAGTACAGTCTGATGATCCAAGTTCTGAAGATTCTTGTCTAGTCAGGTCCAATGCAATTAAAACGTTACTGATATGGAAAGCTGACATTTCAAAGGTATTGGAGATGACTGAATCTGAAATTGATTTGCTTGAAAATGAACTTAAGTCTCTAAAATCTGATTCTGTGGATAGATATCAGTCTCCAGTAGCATTGGGCTCCCAGCAGGCAGGTAGCAGTATAAAAATTTATGAGGAACATGAAGTCTCTCAGAAGGTTATTCGGCCAGTACCATTGAAAATTATTTCTTCCGATGAACCCAATATAGAGATGATGCCACTGTCAACTAATCTATGTAGTATTCATGAAAACGACAAGGAAGAGGATATTGATAGTCCTGGATCAGCAACTTCTAAATTTGTTGAGCCTCTGCCTTTGGTAAAAGCAGTTTCTTCACGTAATACTGGGGGATATGATAACTTATCAAGGGACATGGATACTGTTCAGTCTACTACAATGAAATGCTTAGTCCGGTGTACTACTAGGAAAGATCCTCGTGTATCTGCTTGTAATGATGTTAATAGACCTGCTGATGTAAAGGAAACCTTTGGAGCAAACACATGTTCTAGCTATGAGGATACTTATAATTCAATTATTGCTTCAAATAAAGAATCTGCCAACAGAGCGCATGGAGTATTTGCTAAGTTAGTGCCCAAAGAATGTAAAAATCCTGTTAACATGGGAGTCAGCAACGATTCACTCTGTCAGGCATTTGTTATGGAAAAATTTGCTGAGAAAAAGCGTCTTGAAAAAGTTAAGGAGAGAGTTACTGTACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCTTATTGTCAATTAAGAAATGCCGGCCAAAATCTCATAAGAAAAATGAACCAAGTGTACGGACTACCTGTAGTAGTAATCTGAAGAACCGATCTTCCATTCGTTCTCGGTTTCCTTTCCCTGCTGGAAATCATCTAAGCTTGGTTCCAACATCAGATATTATTAATTTCACAAGCAAACTTCTTTCAGAATCCCAAGCACAGGTTCAGAGGAACACCCTAAAGATGCCAGCATTAATATTGGATGAGAAAGAGAAGATGGTTACAAAATTCATATCTAGTAATGGGCTGGTTGAAGATCCGCTGGCTATTGAGAAAGAAAGAGATATGATCAATCCTTGGACATCAGAAGAGAAAGATATATTCTTAGAGAAATTTGCTGTGTTTGGAAAAGATTTCCGGAAAATTGCTTCTTTCCTTGATCACAAGACAACTGCGGACTGTGTTGAGTTCTACTACAAGAATCACAAATCTGAATGCTTTCAGAAATTGAAGATGAAAGATGTTGACAAGCTAGGGAAGTCATATGCAGCTAGAACTAACTTGATGGCATCAGGTAATAAAAGGATGCAAGCAGGAAGACTGCTGTTGGAAGGATTTGGTAATGTAAAAGCATCGAGGGGCGAGGGCAGCATTATAGAGAGATCAAATAGTCTGGAAACTCTTGGGGATGAAAGGGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGGTCGCTTTCATCTGAGGCCATGAGCTCCTGCATAACAAGTTCAATTGGTCCTGTAGATGGCAACAAGGAAAGGAAATTCTTGAAAGAGAACCCTTTGCGCCAACAACCCTTGATGCCTGATATTTCTCAGAATGCTGATGATGAGACTTGTTCAGATGAAAGCTGTGGGGAAGTAGATCTTTCTGGGTGGACAGATGATGAGAAGGCAGCTTTTCTTCAGGCTGTATCATCTTTTGGTAAGGATTTTACAAAGATAGCACAGTGTGTAGGTACAAGGTCCCGAGAACATTGCAAAGTTTTCTTCAGCAAGACTCAAAAATGCCTTGGATTAAATCTCGTACGCCCCGTACCTGGAATTGTAGGATCCCCGCCTGATGATGATGCAAATGGCGGTGAGAGTGACACAGATGATGCATGTCTTGTTGAGACAGGCTCAGTGGTTGATGCTGATATATCTGGGAATAAAACAGATGAGGACCTGCCTTCTGATGCCTTGAATATATTCCATGCTGAATCCAATCTTCTGGAAGCTAGGAGACTGTCAGCTGAATTAAATGATATATCTGGGAATAAAACAGATGAGGACCTGCCTTCTGATGCCTTGAATATATTCCATGCTGAATCCAATCCTCTGGAAGCTAGGAGACTGTCAGGTGAATTAAATGATATATCTGGGAATAAAACAGATGAGAACCTGCCTTCTGATGCCTTGAATATATTCCATGCTGAATTCAATCCTCTGGAAGCTAGTAGACTGTCGGCTGAATTAAATGAATCAAGAGAAATCACTGGGACAGAAGTACTTCTTGAAAATGTAGATATGATTTCTGATGTTTGTGCAATTAAGGTTGAATCTAAGCCTGCCTCTGATGATAGCGTAGTTGGCTTGGGCAAAACTGACAAGTCTTGTTCAGTCAATGAACATCCAGCTAAAGTTATGTCAGATAGCATAGAAGTTGCAAATAAATTGGGAGATGCAGCTAGAGAATCAATTTATACTGTAGGAATAATTAAACCACTGGAGTGTGGTTCTGTTGATATGGATACAATGGTTTCAGAGGGTTCTTCTAGGGATCTCAGAAATGAAGTGGAAAGGCAAAGAGTGGAAGCACCCCCATGCTTTGATGATAGAGATGATAAACATGAAGCGGATGCAGGTGTTGTAGTTGAATTGAAAAGTTGTGTGTTAGAGTCAAGCATTTCCGCAAATCTTTCATTCTCACATGTGGCCAATTCATGCTCAGGATTGAGCTTTGGTTCTGAAAATAAGCATGTCTCCTTTGGAAAGCCTCATGCCTCAGCATTATCTACGAACAATTCTTGGACTACTACAAATTCATTGTTGCTAAACTCTGCTCCTCCATGTGAAAAAGCAGTTAGCCAGGATAGATTGTCCTCTAGTTGTGATATTCAAAGAGGTAGAGACATGCGGTGTCATAGTTCTGGCAGCAACGGTGACCATCAGCTTCCTCTTCCATGCAATCATCTTGAGACTGTTAGCATCCTCCAGGGCTATCCCATGCAGGTGCCCGTCAAGAAGGAAGTTGACGGGGATGTGAATTGCAGCAGTTCAGCAACTGAGTTCCCTCTTCCCCAAAAGGTACAACAGACTGATGATCATTTCAAAACATTATGCCATTCTTCTGATTCAGAAAAAACATCCAGAAATGGTGATGTGAAACTTTTTGGGAAGATTCTTACTAATCTTTCTTCCAATCAGAAACCTAATTTGATTACAAAGGGAAGTGAAGAAAGTGGTACCCATCATCCCAAGTCAAGCAACAAGTCTTGTAAACGGAAATTTACTAGCCATCAAAATTCTGATGGAAATTTGAAAATTTTGAAGTTTGACCACGCTGATTATCTTGGCCTTGAAAATGTTCCAGTGAGGAGTTATGGTTATTGGGGAGGGACTGGAATAATACAGACTGGTCTCCCATCATTGCCCGATTCTTCCTTCTTGTTGGCTAAATATCCTGCTGCCTTCAGCAATTATCCTACATCCTCTTCCAGTTTGGAGCAACAACCATTGCAGCCGTTTGGTGCATCTACTTTTAATGCTAGAGACATCAATGGAAGCAATGCCATGGTTGACTATCCGATGTTTAGAAGTAGGGATAGTCCAAAAGGGCAGCCATTTCTAGTAGATGCCAATCACAGCCAAGATGTATTCTCTGAGATGCATAGAAGGAACAGTTTTGAAGCAATATCTAGTATGCAGCAGCATGGAATAGGAGTGATGGGAATGAATGGCGTTGGAAGACCTGGGATTCTAGTGGGTGGTTCATGCAGCGGTGTCTCGGATCCTGTGGCCGCAATTAAAATGCATTATTCTAATTCGGAAAAGTATGATGGTCAGAGCGGGAGTATCTTGAGAGATGATGATTCTTGGGGAGGGAAAGGGGACAATGGCAGGTAG 5172 0.4201 MPPEPLPWDRKDFFKERKHERSESVGSVARWRDSSHHRDLNRWGSTEFRRPPGHGKQGGWHMFSEEPGRGYGVSRSGDKMLEEDSRPSVSRDGKYGRSSKDNRGPSGQRDWRGHSWEATNGSPNLSRRSSDMNNDRRSVDDSTTYSSHPHSDSVNTWKQQHLKDQHDKMGGVNELGAAPRCDKENSSIDWKPLKWNRSGSLSSRGSGFSHSSCSRSMAGADSNEAKPDLKPKNITAIELHSGEGTACVTSSMPSEDTTSRKKKPRLNWGEGLAKYEKKKVERPDPGANKDGSVSYAGNMEPCNFISSNLVDKSPKVTEFSDCASPATPSSVACSSSPGVDDKLLGKTANADNNLSNLSDSPAPGFQNHLQKFCLSLDNLDIDSLNNLGSSIVELVQSDDPSSEDSCLVRSNAIKTLLIWKADISKVLEMTESEIDLLENELKSLKSDSVDRYQSPVALGSQQAGSSIKIYEEHEVSQKVIRPVPLKIISSDEPNIEMMPLSTNLCSIHENDKEEDIDSPGSATSKFVEPLPLVKAVSSRNTGGYDNLSRDMDTVQSTTMKCLVRCTTRKDPRVSACNDVNRPADVKETFGANTCSSYEDTYNSIIASNKESANRAHGVFAKLVPKECKNPVNMGVSNDSLCQAFVMEKFAEKKRLEKVKERVTVLKFKALHHLWKEDMRLLSIKKCRPKSHKKNEPSVRTTCSSNLKNRSSIRSRFPFPAGNHLSLVPTSDIINFTSKLLSESQAQVQRNTLKMPALILDEKEKMVTKFISSNGLVEDPLAIEKERDMINPWTSEEKDIFLEKFAVFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFQKLKMKDVDKLGKSYAARTNLMASGNKRMQAGRLLLEGFGNVKASRGEGSIIERSNSLETLGDERETAAAADVLAGICGSLSSEAMSSCITSSIGPVDGNKERKFLKENPLRQQPLMPDISQNADDETCSDESCGEVDLSGWTDDEKAAFLQAVSSFGKDFTKIAQCVGTRSREHCKVFFSKTQKCLGLNLVRPVPGIVGSPPDDDANGGESDTDDACLVETGSVVDADISGNKTDEDLPSDALNIFHAESNLLEARRLSAELNDISGNKTDEDLPSDALNIFHAESNPLEARRLSGELNDISGNKTDENLPSDALNIFHAEFNPLEASRLSAELNESREITGTEVLLENVDMISDVCAIKVESKPASDDSVVGLGKTDKSCSVNEHPAKVMSDSIEVANKLGDAARESIYTVGIIKPLECGSVDMDTMVSEGSSRDLRNEVERQRVEAPPCFDDRDDKHEADAGVVVELKSCVLESSISANLSFSHVANSCSGLSFGSENKHVSFGKPHASALSTNNSWTTTNSLLLNSAPPCEKAVSQDRLSSSCDIQRGRDMRCHSSGSNGDHQLPLPCNHLETVSILQGYPMQVPVKKEVDGDVNCSSSATEFPLPQKVQQTDDHFKTLCHSSDSEKTSRNGDVKLFGKILTNLSSNQKPNLITKGSEESGTHHPKSSNKSCKRKFTSHQNSDGNLKILKFDHADYLGLENVPVRSYGYWGGTGIIQTGLPSLPDSSFLLAKYPAAFSNYPTSSSSLEQQPLQPFGASTFNARDINGSNAMVDYPMFRSRDSPKGQPFLVDANHSQDVFSEMHRRNSFEAISSMQQHGIGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSEKYDGQSGSILRDDDSWGGKGDNGR* 1724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4223 1723 ProSiteProfiles SANT domain profile. 976 1027 IPR017884 -
Psa6g4223 1723 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1696 - -
Psa6g4223 1723 MobiDBLite consensus disorder prediction 1 185 - -
Psa6g4223 1723 CDD SANT 981 1019 IPR001005 -
Psa6g4223 1723 SUPERFAMILY Homeodomain-like 775 836 IPR009057 -
Psa6g4223 1723 Pfam Myb-like DNA-binding domain 981 1020 IPR001005 -
Psa6g4223 1723 MobiDBLite consensus disorder prediction 76 110 - -
Psa6g4223 1723 Gene3D - 768 840 - -
Psa6g4223 1723 MobiDBLite consensus disorder prediction 8 45 - -
Psa6g4223 1723 SMART sant 788 836 IPR001005 -
Psa6g4223 1723 SMART sant 977 1025 IPR001005 -
Psa6g4223 1723 MobiDBLite consensus disorder prediction 1491 1520 - -
Psa6g4223 1723 ProSiteProfiles SANT domain profile. 787 838 IPR017884 -
Psa6g4223 1723 Coils Coil 420 447 - -
Psa6g4223 1723 MobiDBLite consensus disorder prediction 199 264 - -
Psa6g4223 1723 MobiDBLite consensus disorder prediction 1701 1723 - -
Psa6g4223 1723 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1696 - -
Psa6g4223 1723 SUPERFAMILY Homeodomain-like 979 1027 IPR009057 -
Psa6g4223 1723 MobiDBLite consensus disorder prediction 113 129 - -
Psa6g4223 1723 MobiDBLite consensus disorder prediction 199 219 - -
Psa6g4223 1723 Gene3D - 941 1032 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4223 Psa-Chr6 373147281 373157810 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Psa6g4223 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4223 - - cam:101504689 2486.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4223 6 373147281 373157810 Psa6g4223 6 373147281 373157810 ECH