Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4215 ATGGGGAGGAAAGGAAGTTGGTTTTCTTCTGTTAAGAAAATTTTCATATCTGATTCCAAGAAAGATCAGAAACCTCATCAGAATCTTAAGTCAAAGTTAACATGTTTTGGACATCCTCATGAACATTTCGAGGATCCTGAATTAGAATCTAGAGAAGTTGTTTATGTTCCATCTCTTCCTAGAAGAAAAACTGTTGTCAAACCGAAAAACACCGAGGCAGAAGATGAACGCAAAAAACAAGCTTTATCCTTAGTTTTAGCCACGGCCGTTGCTACAGGCGCGGCCGTGGCTGCTGCTCAGGCCACTCGTCGCGCATCTCTTCCTCTTCCTCCTTGTTATATTGGAAAAACAGCTCAAGAGATAGCAGCTATGAAAATTCAATTCGCCTTTCGTGGATATTTGGCGAGGAGGACTTTGCGCGGATTGAGAGGCTTGGCGAGGTTGAAAGCATTGGTGAAAGGCCAATCTGTTCAACGACAGGCGGCTACTACATTGCAATGTATGCAAACGCTTTCGCGGTTGCAGTCTCAGGTCAGTGCGAGGAAGGTCAGAATGTCGGAGGAGAATCAATCTTTCCAACGCCAGTTGCAACAGAAGCGCGAAAAGGAACTTGATAAGTTACACGCTGCGCCTATTGAAGAATGGGATTATAGTTCGAAATCGAAGGAGCAAATCCAAGCGAGATTGATGCATAGACAAATCGCGGCCATGAGAAGAGAAAAGGCTTTGGCCTACTCGTCAACACATCAACAAACATGGAGGAACGCTCCGAAAGAATCGGTTGAGGCGACGATTATGGATCCAAATAATCCTCATTGGGGGTGGAATTGGCTTGACAGATGGATGGATTCAAGGCCATGGGAAGGACAAAACACAAAGGATGAAAAGAATCATAAATCAGCAAAAGGTGCTGCAAATCACACTATGTCAGTTGGAGAAATCTCTAAATTGTATGCTCTAAGAGATCAAAATCAAGATAGTAAAAACTCTCCTACAAGCCAAAAACCAAGTCATCAAACTCTAGCTTCAAGGAGCGTACTTTCAGCACCTGTTAAAGGAAAAGCAAAAACATCAACCACTGGTTCTTGGGGTGGTGATGGTGATTCAAAGTCCGTGTTCAACAAGAATCCCGAAACTAATCGAAGACATAGCATTGCGATATCTCCGGAGAAAGAAGATGTAAGCTCACCTGCAAAGGTTGCAAAGACTAAAAGCAAAGTGCAAAGTACTCCTGCTAAGAAGCAGCTTTCTTTCCCAGCTTCTGGTACAAGAAGGCATTCTGTTCCAAGTAAAATAGGAATGAGTTCTAATAAGAATGGTGTGGCTACTACTATTCCTGAAGGGAAAGTGAAAGTGAGAAATGGAGGGACCAGGTAA 1377 0.4328 MGRKGSWFSSVKKIFISDSKKDQKPHQNLKSKLTCFGHPHEHFEDPELESREVVYVPSLPRRKTVVKPKNTEAEDERKKQALSLVLATAVATGAAVAAAQATRRASLPLPPCYIGKTAQEIAAMKIQFAFRGYLARRTLRGLRGLARLKALVKGQSVQRQAATTLQCMQTLSRLQSQVSARKVRMSEENQSFQRQLQQKREKELDKLHAAPIEEWDYSSKSKEQIQARLMHRQIAAMRREKALAYSSTHQQTWRNAPKESVEATIMDPNNPHWGWNWLDRWMDSRPWEGQNTKDEKNHKSAKGAANHTMSVGEISKLYALRDQNQDSKNSPTSQKPSHQTLASRSVLSAPVKGKAKTSTTGSWGGDGDSKSVFNKNPETNRRHSIAISPEKEDVSSPAKVAKTKSKVQSTPAKKQLSFPASGTRRHSVPSKIGMSSNKNGVATTIPEGKVKVRNGGTR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4215 458 MobiDBLite consensus disorder prediction 384 399 - -
Psa6g4215 458 PANTHER IQ-DOMAIN 5-RELATED 1 449 - -
Psa6g4215 458 MobiDBLite consensus disorder prediction 323 383 - -
Psa6g4215 458 Coils Coil 182 202 - -
Psa6g4215 458 MobiDBLite consensus disorder prediction 401 443 - -
Psa6g4215 458 MobiDBLite consensus disorder prediction 289 309 - -
Psa6g4215 458 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Psa6g4215 458 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 449 - -
Psa6g4215 458 MobiDBLite consensus disorder prediction 323 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4215 Psa-Chr6 372499432 372501929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4215 1 432 IQD Protein Family AT5G03040 38.347 8.01e-81 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4215 - - gmx:100807725 451.055