Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4171 ATGGCCAAGAAAACCAACTCTTCTACTCATTCTTCATCTCAAAACCCACATGCACGCAAAACCACTCCAGATCCAACACAAACACTTCCTCTTCCTTCAAAACCCTCATCACTCTCTTCTCAATCTCAACCACTTTCCACTTCATTCCCTCACCGTCCTAACCGTTCCAAGAAACCCACACCTGTCGCCGCCGCTGCCGCCGCCGCCGCAGAATCCTCCAAAAAGTTCCAGAGAGTCTTCTTCACTTCCGACGACGTCGTACTCATTCTTAAATCCCTTTCAGATTTCAAATCCAAAACTGGAAAAGATCCACTCAAACACCTCACTGCTTTGCACGACTCGTTGAAGAGTTCGCTTAGTATTAAAACCACAGTAAGGAAACTCAGAGAGAAGATTCGGACTTTGAAGATCAAGTTTGAGAAGCTACGTGAAAACAGCCAAGAAAATATTAACTTTTCCTGTCCTTTGGAGGAGGAAGCATTTCAGCTTTCTAACAAGTTTTGGGGTCAAGACAATGAAGTTGAAGACGAAGACGAAGAAAAATCACCTGAGAAGGAAAATGCTGCTAAGAATCTGATGCTGGAAGAATCACCCAAGAAGGAAAATGCTGCTAAGAAACCATCATCGTCGAAGAAACCGGTCCAGGAAGAACCACCTAAGAAGGCTAAGAAACCATCGACATCAAAGAAGAAACCGATCCAGGAAGAGCTATCATCTGTTGTTGACAGTGATAAAATGGGTCGTCTTAGTTTGGGTGAAATGTTTCGTTTTGGTGAAATGCGCATGGATGTGAATGTGCTCAAGAGGGGAATGGAGTTGATTGGGGAATCTGAGAGGGAAGAATTGGAAAAAAGGTGGAAGAAGTTGAAAGTTCAAGAGGCGGAAGTGTTTGTGAAGCGTGCCGAGTTGGCTGTAGATCAAGGTAGATTGATTTTGAAGGAATTGAAAAGATCCTCTTAG 960 0.4375 MAKKTNSSTHSSSQNPHARKTTPDPTQTLPLPSKPSSLSSQSQPLSTSFPHRPNRSKKPTPVAAAAAAAAESSKKFQRVFFTSDDVVLILKSLSDFKSKTGKDPLKHLTALHDSLKSSLSIKTTVRKLREKIRTLKIKFEKLRENSQENINFSCPLEEEAFQLSNKFWGQDNEVEDEDEEKSPEKENAAKNLMLEESPKKENAAKKPSSSKKPVQEEPPKKAKKPSTSKKKPIQEELSSVVDSDKMGRLSLGEMFRFGEMRMDVNVLKRGMELIGESEREELEKRWKKLKVQEAEVFVKRAELAVDQGRLILKELKRSS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4171 319 MobiDBLite consensus disorder prediction 183 241 - -
Psa6g4171 319 PANTHER BNAANNG10740D PROTEIN-RELATED 4 318 IPR007592 GO:0006355
Psa6g4171 319 PANTHER STOREKEEPER PROTEIN-LIKE 4 318 - -
Psa6g4171 319 MobiDBLite consensus disorder prediction 171 241 - -
Psa6g4171 319 MobiDBLite consensus disorder prediction 1 54 - -
Psa6g4171 319 MobiDBLite consensus disorder prediction 1 65 - -
Psa6g4171 319 Pfam Protein of unknown function, DUF573 76 169 IPR007592 GO:0006355
Psa6g4171 319 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4171 Psa-Chr6 367603400 367605176 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4171 25 313 GeBP Transcription Factor Family AT4G25210 25.000 9.13e-15 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Psa6g4171 DUF573 3.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4171 - K04237 cam:101514741 165.236