Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4168 ATGGATATCACAATAACATCAAAAGAAACAATCAAACCATCATTTCCCACACCTAATGAACACAAACTCTTCAAACTATGTCTATTTGATCAACTTCAATTAGTAACATATTTACCTATGGTGATGTTTTACCCCAAAAAACAAGGCCTAACACAAATCTCCCATTTCATTTCTCAATTAAAAAAATCACTTTCTGAAACACTAACAATTTTCTACCCTATAGCAGGAAGAAGAAAAAACCACACATTCATCACATGTAATGATGAAGGTGCTATTTACTTGGAAGCCAAGGTAAACCAAACCATCGTTGAATTCCTCACACCACCTAAGCTACAATTTCTAAACAAATTGCTTCCATGTGAGCCTAATAAAATGCATCAAAATAATGGAGAAGAAGACTTACCACAAGTGCTTGTTCAAGTTAACATATTCAATTGTGGTGGAATAGCTATAGGTACTTGTAATCTCCATACCCTCCTCGACGGTTGTTCCGGCAGCCTTTTCCAAACTACTTGGGCCGCCATTTGTTGTGGCCGCCCTAGCGATGAATTGCCTCGTCCCGATTTCTCTTCTGCTTCTTCGTTCTTTCCACCAAATGATAATTTAATTTTGCATGATCATGTTGGTAAGAATGATAATGAGGTCTTAGATGTTCAAAAGAAATGTAGCACGAGAAGATTTGTGTTTGGTTTAGAATCGATCAACGCTCTACGAGATAAAGCAAAAGACGATGATTATAATGATAGTGATAATGGAAATGATTATGAAAGATCTAAGTTTCCAACAAAATATGAAGTATTAGCTGCTTTTATTTGGAAACACATGACACTTGCATGTAAAAAGGAAGGAGGTGTAGATAGCAAACGGCCAACATTGGCTATACATATTGTGGACATGAGGAGAAGGATGGGTGAGCCATTTTCTAAATACACTATAGGCAACATTTTATGGCCAGTGATGGTGTTTTGTGAAGAAGTTAATGAAGAAAGTGATATAAAGTATTTGGTTAGAATTTGTAAGGAGAAATTTGGGAAGGTTTCAAGGGAATTGTTTTTAAGAGTGAAGAATGATACAAGTATGTTAGGAAGCAATGAATGTGTGGATTTGCCACAAGGTGTTGAGACAAAGTGTCCAATTCCAGTTGTTTTGACAAGTTGGTGTGGTTTGAATTTCAGTGAGCTTGATTTTGGTTTGGGGAAGCCTTATTGGGTTGGTGTTAGAGGTGGTGATCAAGAAACTCTTCCTAATGTAGCTGTTATTATGGAAACAGATGAAGGAATGGAAGCTTGGTTGACAATGGAAATGGAACATATAGGTAACTTGGAAAATGACATGGAGTTTCTTAAATTAGCTTTGCCTAATCCTAGTGTTTCAAACACATTGTTAGTATGA 1392 0.3642 MDITITSKETIKPSFPTPNEHKLFKLCLFDQLQLVTYLPMVMFYPKKQGLTQISHFISQLKKSLSETLTIFYPIAGRRKNHTFITCNDEGAIYLEAKVNQTIVEFLTPPKLQFLNKLLPCEPNKMHQNNGEEDLPQVLVQVNIFNCGGIAIGTCNLHTLLDGCSGSLFQTTWAAICCGRPSDELPRPDFSSASSFFPPNDNLILHDHVGKNDNEVLDVQKKCSTRRFVFGLESINALRDKAKDDDYNDSDNGNDYERSKFPTKYEVLAAFIWKHMTLACKKEGGVDSKRPTLAIHIVDMRRRMGEPFSKYTIGNILWPVMVFCEEVNEESDIKYLVRICKEKFGKVSRELFLRVKNDTSMLGSNECVDLPQGVETKCPIPVVLTSWCGLNFSELDFGLGKPYWVGVRGGDQETLPNVAVIMETDEGMEAWLTMEMEHIGNLENDMEFLKLALPNPSVSNTLLV* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4168 463 Pfam Transferase family 1 447 - -
Psa6g4168 463 Gene3D - 219 450 IPR023213 -
Psa6g4168 463 Gene3D - 1 207 IPR023213 -
Psa6g4168 463 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 455 - -
Psa6g4168 463 PANTHER F21J9.9 4 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4168 Psa-Chr6 367406814 367408677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4168 37 442 Monolignol Biosynthesis Gene Families AT5G48930 24.771 7.69e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4168 - K13065 gmx:102668997 681.789