Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4164 ATGGAGTTTTCAAATGGAGATCATAGCAATGGCAGTAACAACAACAATAATCTCTGCAATGGTCAAAATGGCGACCCTCTGAATTGGGGTATGGCTGCCGATTCAATGAGAGGTAGTCATCTTGATGAAGTGAAACGTATGGTTGTGGAGTACCGGAAACCGGTTGTGGCATTAGGTGGAAAGGGGTTAACGATATCTCAAGTGGCTGCGATTGCTACACACAACACCGGCGTGGCGGTTGAACTTGCCGAAGAGCCGCGCGCCGCCGTTAAAGCTAGTAGTGACTGGGTGGTTGATAGTATGAATAAAGGGACGGATAGCTACGGAGTCACCACGGGGTTTGGTGCAACCTCTCACAGGAGAACAAAACAAGGTGGTGCTCTTCAAAATGAACTCATAAGATTTCTGAATGCCGGAATTTTCGGCAATGGAACAGAAACAATTCAAGCATTACCTCACACAGCTACAAGAGCAGCCATGTTGGTTAGAATCAACACACTGCTTCAAGGATATTCAGGAATAAGATTTGAAATCATGGAGGCAATAGCAAAATTTCTGAACCATAACATAACACCATGTCTTCCATTAAGAGGCACAATCACTGCATCAGGTGACTTGGTTCCTTTATCCTATGTTGCTGGTCTTTTAATCGGACGTCCGAACTCGAAATCTATTGGACCTGATGGAAAAATTCTCAATGCTAAAGAGGCTTTTCAACTAGCCGGAATCGAAACTGGTTTTTTCGAGTTGCAGCCGAAAGAAGGTTTGGCGTTGGTGAATGGTACTGCGGTTGGATCAGGTTTGGCTTCGTTGGTTCTGTTTGAGACGAATTTACTTGTTGTTTTGTCGGAGATTTTGTCGGCGATTTTCGCCGAGGTTATGCAAGGAAAGCCTGAATTCAGTGACCATTTGACTCATAAGCTGAAACACCATCCTGGTCAAATTGAGGCTGCTGCTATAATGGAGCATATTTTAGATGGAAGTTATTATGTTAAGGCTGCTCAAAAAGTACATGAAATTGATCCACTTCAGAAGCCTAAACAAGATAGGTACGCGCTTCGGACGTCACCACAGTGGCTGGGACCGCAGATTGAAGTGATTCGACACGCGACAAAGATGATTGAGAGGGAGATCAATTCCGTGAATGACAATCCACTTATTGACGTTTCAAGGAATAAGGCACTTCATGGAGGAAATTTCCAAGGTACACCGATCGGCATTTCCATGGATAACACACGTTTAGCCATTGCTTCGATCGGGAAACTCATGTTTGCGCAATTCTCAGAGCTTGTGAATGATTTTTATAACAACGGATTGCCTTCGAACCTAACCGCGAGTCGCGATCCGAGTTTGGATTACGGCTTCAAAGGCTCAGAAATTGCAATGGCATCCTATTGCTCAGAGCTTCAATACCTTGCCAATCCTGTCACTACTCATGTTCAAAGTGCTGAGCAGCATAACCAAGATGTTAACTCCTTAGGCTTGATTTCATCAAGAAAAACCGCAGAAGCGGTTGAAATATTGAAACTCATGTCATCGACTTACTTAGTCGCATTGTGCCAAGCAATTGATCTGAGGCACATTGAAGAAAACTTGAAAACCGTAGTCAAGAACAATGTGAGTCAAGTGGCTAAGAGAATTCTCACAGTTGGTTTAAATGGCGAGTTGCATCCATCAAGGTTCTGCGAGAAAGATTTGCTCAACGTTGTCGAACGTGAGTACGTGTTCGCTTACATCGATGACCCTTGCAGCGCTACATACCCTCTAACGCAGAAGCTGAGACATGTACTAGTTGATCATGCACTGCAAAACGGCGATAAGGAGGCAAATTCAGCAACCTCGATTTTCCAAAAGATTGGAGCTTTTGAGGAAGAGCTTAAGACCCTTTTACCTAAAGAGGTTGAAAATGCAAGAGCTGAAGTTGAAAGTGGAAACCCCGCAATTCCTAACAGGATTAAGGAATGTAGGTCTTATCCATTGTACAAGTTTCTGAGAGAAGATTTGGGGACAAGTTTGCTGACAGGTGAGAAAATTATGTCACCAGGTGAAGAATGTGACAAGGTTTTCTCAGCATTGTGTGATGGAAGTTTTATTGATCCTATGTTGGATTGTCTTAAGGAATGGAATGGTGCTCCTCTACCTATATGCTAG 2151 0.4361 MEFSNGDHSNGSNNNNNLCNGQNGDPLNWGMAADSMRGSHLDEVKRMVVEYRKPVVALGGKGLTISQVAAIATHNTGVAVELAEEPRAAVKASSDWVVDSMNKGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGNGTETIQALPHTATRAAMLVRINTLLQGYSGIRFEIMEAIAKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPDGKILNAKEAFQLAGIETGFFELQPKEGLALVNGTAVGSGLASLVLFETNLLVVLSEILSAIFAEVMQGKPEFSDHLTHKLKHHPGQIEAAAIMEHILDGSYYVKAAQKVHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRHATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGISMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRDPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTYLVALCQAIDLRHIEENLKTVVKNNVSQVAKRILTVGLNGELHPSRFCEKDLLNVVEREYVFAYIDDPCSATYPLTQKLRHVLVDHALQNGDKEANSATSIFQKIGAFEEELKTLLPKEVENARAEVESGNPAIPNRIKECRSYPLYKFLREDLGTSLLTGEKIMSPGEECDKVFSALCDGSFIDPMLDCLKEWNGAPLPIC* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4164 716 SUPERFAMILY L-aspartase-like 25 716 IPR008948 GO:0003824
Psa6g4164 716 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 25 706 IPR005922 GO:0005737|GO:0006559|GO:0016841
Psa6g4164 716 CDD PAL-HAL 61 526 IPR001106 -
Psa6g4164 716 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841
Psa6g4164 716 Gene3D - 529 650 IPR023144 -
Psa6g4164 716 Gene3D Fumarase/aspartase (Central domain) 263 711 - -
Psa6g4164 716 Gene3D - 17 262 IPR024083 -
Psa6g4164 716 Pfam Aromatic amino acid lyase 63 530 IPR001106 -
Psa6g4164 716 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 14 716 - -
Psa6g4164 716 PANTHER HISTIDINE AMMONIA-LYASE 14 716 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4164 Psa-Chr6 367184393 367188923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4164 1 716 Monolignol Biosynthesis Gene Families AT2G37040 78.621 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4164 K10775 - gmx:100801470 1246.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4164 6 367184393 367188923 Psa6g4164 6 367184393 367188923 ECH