Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4162 ATGTGCAAATCTAAGAAAAGCACCACCGTGGTGCAACCCACAAACAGAAACCCTAGGCGAACATCAACTTCTCCTTCGTCTTCGAATTTTCCATCTTCCAACAGTGAAGTTCCAATCACAGAATCAAGAAGTTACGTATACGGTGGAAAAGATAAAGAATGGTCAAAAACTTCTTCTTCTTCTGTATCTAGCCACGCTTCTCTTGCAAGCCTCAAACACACTCTTCCAGAAAACCCTCACATATACCCTATCTCTGAGATCTCAACCGCCACCGCCAACTTTTCCGCCAACCGTCTCTCCTCCAACTCTTTCCGCTGTTCCCTACGTGATCGGGATGTCGTCATTTTCCAGCGGAAATTCCGCCTTCAGATAGATCTTCAAGAGGTTCGTGATCGTCTGGCTCTTATCTGCCGGAGCCACCATAGTAGTCTTGTTAAACTCCTCGGAGCTTCGGTTTCTGGTAACTGCATTTACCTTGTTTATGAGTTCGTTCCCGGTGCTAACCTTTCTGACTGCCTTCGCAATCGCCAGAACCCTAGCTTCACCAGTCTCTCCACGTGGACATCACGGATGCGAATCGCCTCCGATCTTGCTCACGGTCTGGATTATGTCCACAATTCATCCGGTTCGGGTTCTGGTTTCGTCCACAACCATATTAAAAGTTCTAGCATCCTCGTTTCTGAAGAGAATTTTAGCGCGAAGATTTGTCATTTCGGTACGTCGGACCTCTGCGGCGAGTCCGTTGGTGAGTCTTCCGTAACGGACACTGGCCGGAAATTGAAGAAATCTGGTAGCCGTGGGGTGAGGCTTGAGGGGACGAGGGGGTACATGGCGCCGGAATTTCTTTTAACCGGCGTGGCAACGCAGATGACGGATGTGTACGCGTTCGGCGTGGTGGTTCTGGAGCTTCTGAGCGGGGAAGAAGCGGTGAGGTTTGAATTGGAAGGTAATGACGGCGGGTACAGGAGGGTAAGTGTGGTGGATACGGCGATGGACGCCTGGAAGGAGCACGGCGGAGTGAGAAAGTGGGTTGATCGGAGGTTGAGGGATTCGTTTCCGATGGACGTGGCAGAGAAAATGATTCGGGTCGGATTAGATTGCGTTACGGATGATCCGAGAGAGAGACCGGATATGGGTCGGGTATCTATGAAAGTATCCAAGTTGTATTTGGAATCGAAGGAGTGGGAGGAAAAATTAGGAACAAACTTTGATTTTTCGGTCTCATTAGCCCCACGGTGA 1239 0.4972 MCKSKKSTTVVQPTNRNPRRTSTSPSSSNFPSSNSEVPITESRSYVYGGKDKEWSKTSSSSVSSHASLASLKHTLPENPHIYPISEISTATANFSANRLSSNSFRCSLRDRDVVIFQRKFRLQIDLQEVRDRLALICRSHHSSLVKLLGASVSGNCIYLVYEFVPGANLSDCLRNRQNPSFTSLSTWTSRMRIASDLAHGLDYVHNSSGSGSGFVHNHIKSSSILVSEENFSAKICHFGTSDLCGESVGESSVTDTGRKLKKSGSRGVRLEGTRGYMAPEFLLTGVATQMTDVYAFGVVVLELLSGEEAVRFELEGNDGGYRRVSVVDTAMDAWKEHGGVRKWVDRRLRDSFPMDVAEKMIRVGLDCVTDDPRERPDMGRVSMKVSKLYLESKEWEEKLGTNFDFSVSLAPR* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4162 412 Gene3D Phosphorylase Kinase; domain 1 53 163 - -
Psa6g4162 412 Pfam Protein tyrosine and serine/threonine kinase 125 382 IPR001245 GO:0004672|GO:0006468
Psa6g4162 412 PANTHER OS09G0572100 PROTEIN 1 412 - -
Psa6g4162 412 PANTHER OS09G0572100 PROTEIN 1 412 - -
Psa6g4162 412 MobiDBLite consensus disorder prediction 1 37 - -
Psa6g4162 412 Gene3D Transferase(Phosphotransferase) domain 1 165 406 - -
Psa6g4162 412 ProSiteProfiles Protein kinase domain profile. 93 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g4162 412 SUPERFAMILY Protein kinase-like (PK-like) 122 384 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4162 Psa-Chr6 367122182 367123420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4162 77 402 Receptor kinase-like Gene Family AT1G51940 34.024 1.74e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa6g4162 PK_Tyr_Ser-Thr 1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4162 - - mtr:MTR_1g094730 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4162 6 367122182 367123420 Psa6g4162 6 367122182 367123420 ECH