Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4103 ATGTGTTACTATGAGTTTTTGCCCGTTAATAAAACCGATGGTGTCGTTGGTTCTCTTCACACACCTAGATCCCATAACAAGAAAGAACAGAAAGAGCTCGTTGAACTTGTTGATGTCAAACTCGGTCAAGAGCTTGAACTTGTTATCACTACTTATGCCGGACTATACCGTTATAGAGTTGGTGATGTGCTGAAGGAACGGCATGTGTCTCAGTTGCTTGGTACAGAATCTTGTGAATGTGTATCAATATTCCGAAGAGGCGAAGCACTTTCAACTTCTTCATCTCTTCACAAAACAACATCCATGACATCTGCAGCATCACTTGATAATTCTCTATCGGACATGTGTCGTTCTCCTCCAAGGCCCTTACCATATGATGCAGAGCCTCTAAACTCAGCAGACAAATGGAATGAATGTGCTCGAGAAGATGAATTGAAGATATACCGTTCTAAGTCTGCATCAAGAGCTTCCATCAGCAAAACATACACCTGGAGTTGGGCTTGTTTACACGTCATCATCAGAAGAAGAGGATATATGTTCAACTTGCCTTGA 552 0.4185 MCYYEFLPVNKTDGVVGSLHTPRSHNKKEQKELVELVDVKLGQELELVITTYAGLYRYRVGDVLKERHVSQLLGTESCECVSIFRRGEALSTSSSLHKTTSMTSAASLDNSLSDMCRSPPRPLPYDAEPLNSADKWNECAREDELKIYRSKSASRASISKTYTWSWACLHVIIRRRGYMFNLP* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4103 183 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 66 IPR004993 -
Psa6g4103 183 PANTHER - 1 66 - -
Psa6g4103 183 Pfam GH3 auxin-responsive promoter 1 65 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4103 Psa-Chr6 359643993 359645367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4103 81 129 C3H Transcription Factor Family AT5G15790 52.000 1.53e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4103 K14487 - gmx:100791987 109.768