Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4085 ATGATGCCCCCTGAGCAAGAAACAAGTATTAAGGCACCAAATAACAACTCACCCAACACAAACAGATCAGAGAGTAGCTCCATCCATGGCGGTGAGCCAGAAGGTTCTTCTTCGAACAAAGTTAAACCTAGTTTGGATATCGATCACACCGCCATTAATATTCCTTCTCATCCAACTACACCAGTAACAACATTTTCTATTCTTCCTCAGTCCCTGAGACCAATCACCCTCAAATTTGAAGATGTTTCATATAGTATAACCTTAACAAACCAAAAGAAAAGCGGTTGCGTTTTGGGAAAAGAATCAAAGGTAACAAGAAAAGTGTTAAACGGAGTCACCGGAATAGCGAGACCCGGCGAGTTAACAGCAATGTTAGGTCCGTCAGGCAGCGGCAAGACCACCCTGCTGACGGCCCTTGCCGGAAGACTTACCGGGAAAGTTACCGGTACAATAACATACAACGGAAACTCCGATTCAAGCTGTATGAAACGCAAGATAGGGTTTGTTTCACAAGACGACGTCGTTTACCCTCACCTAACAGTGTTGGAGACGCTAACCTACACTGCTCTGTTGAGGCTTCCCAAAACTCTTACCCGGGAAGAGAAAGTAGAACATGCGGAGAGGATAATCACCGAGCTCGGTCTTACGCGGTGTCGAAACAGTCCCGTCGGTGGGTGTATGGCGCTTTTCCGGGGAATCTCCGGCGGGGAGAGGAAACGGATGAGTATTGCGCAAGAGATGTTGGTGAACCCGAGTTTGTTGTTGCTGGATGAACCGACTTCCGGTTTGGACTCAACCACGGCTCAACTTATTGTTTCGGTTCTTAGAGGACTCGCCCGGTCCGGTCGAACCGTTGTGACTACTATTCATCAGCCTTCGAGCCGGTTGTATAGGATGTTTGATAAAGTGGTGGTTTTATCTGACGGGTACCCGATATATAGTGGAAACGCGGGTCGGGTCATGGATTATCTTGGATCCGTTGGATTTGTTCCGGGTTTCAACTTTGTTAATCCTGCTGATTTTTTACTTGACCTTGCTAATGGAATAATTGCTGATGCGAAACATGATGATGAGATAGATCAATATGATCAAGATCAAGCTTCTGTAAAACAATCACTGATTTCATCATACAAGAAAAATTTATACCCTGCTCTTAAAGAAGATATTCAGAAAAACAATATTGAATCATTAGTGTTTACATCACAAGGAACATCTAGACGTTCTTCCGATAACCAATGGAACACTGGCTGGTGGGAACAATTCAGGATTCTGCTCAAGAGGGGTTTACAAGAGAGGAGACACGAATCTTTTTCTCGCTTAAAGATTTTTCAAGTATTGTCTGTTTCTATTCTCTCTGGACTCCTTTGGTGGCACTCTGATCCTTCACACATACAAGACCAGGTAGGACTTCTATTCTTCTTCTCGATCTTTTGGGGATTCTTCCCTCTCTTTAATGCAATCTTTGCATTTCCACTAGAGAAACCAATGCTAACAAAAGAAAGATCATCAGGCATGTACCATCTATCTTCCTACTATGTTGCTAGGATGGTAGGAGACTTACCAATGGAGCTTGTTCTTCCTACTATTTTCGTAACTATCACCTATTGGATGGGCGGTCTTAAGCCTTCTCTTGTAACATTTGTGTTAACTCTTTTGATCATGCTTTTCAATGTTTTAGTCTCTCAAGGAATAGGCTTAGCACTTGGTGCAATTCTAATGGATGTTAAGCAAGCAACAACATTAGCTTCTGTGACAATGTTGGTTTTTCTTTTAGCTGGTGGTTACTACATTCAGAAAATGCCCTCTTTTATTGCTTGGTTAAAGTACTTTTCTTTTAGTCACTACTGCTATAAGCTACTTGTAGGGGTGCAGTATTCAGTAAATGAAATGTATGAATGTAGACAAGGGTTGCATTGTAGGGTAAGAGATTTTCCGGCCATAAAGTGTTTGGAGCTTGACGATACCATGTGGGGAGATGTGGCTGCATTGGCTGTAATGTTTGTTGGATACAGAATTGTTGCATATTTAGCTTTAAGGATGGGTCAACCTAAATGCCAAAAGACTTAA 2067 0.4257 MMPPEQETSIKAPNNNSPNTNRSESSSIHGGEPEGSSSNKVKPSLDIDHTAINIPSHPTTPVTTFSILPQSLRPITLKFEDVSYSITLTNQKKSGCVLGKESKVTRKVLNGVTGIARPGELTAMLGPSGSGKTTLLTALAGRLTGKVTGTITYNGNSDSSCMKRKIGFVSQDDVVYPHLTVLETLTYTALLRLPKTLTREEKVEHAERIITELGLTRCRNSPVGGCMALFRGISGGERKRMSIAQEMLVNPSLLLLDEPTSGLDSTTAQLIVSVLRGLARSGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGNAGRVMDYLGSVGFVPGFNFVNPADFLLDLANGIIADAKHDDEIDQYDQDQASVKQSLISSYKKNLYPALKEDIQKNNIESLVFTSQGTSRRSSDNQWNTGWWEQFRILLKRGLQERRHESFSRLKIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLEKPMLTKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYFSFSHYCYKLLVGVQYSVNEMYECRQGLHCRVRDFPAIKCLELDDTMWGDVAALAVMFVGYRIVAYLALRMGQPKCQKT* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4085 688 MobiDBLite consensus disorder prediction 1 40 - -
Psa6g4085 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 50 681 - -
Psa6g4085 688 ProSitePatterns ABC transporters family signature. 233 247 IPR017871 GO:0005524
Psa6g4085 688 CDD ABCG_EPDR 74 315 - -
Psa6g4085 688 Pfam ABC-2 type transporter 290 354 IPR043926 GO:0140359
Psa6g4085 688 Pfam ABC transporter 110 261 IPR003439 GO:0005524
Psa6g4085 688 MobiDBLite consensus disorder prediction 8 40 - -
Psa6g4085 688 Pfam ABC-2 type transporter 419 625 IPR013525 GO:0016020|GO:0140359
Psa6g4085 688 Gene3D - 73 327 IPR027417 -
Psa6g4085 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 333 IPR003439 GO:0005524
Psa6g4085 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 50 681 - -
Psa6g4085 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 327 IPR027417 -
Psa6g4085 688 SMART AAA_5 118 311 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4085 Psa-Chr6 358202192 358206069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4085 107 309 Calmodulin-binding Proteins AT2G36910 30.516 7.33e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4085 K05681 - gmx:100783696 1089.72