Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4056 ATGTCTCAGACTGTTGTTCTCAAAGTTGGTATGTCATGTGAAGGATGTGTTGGAGCAGTGAAGAGAGTTCTGGGAAAATTGGATGGTGTGGAATCATATGACATTGATTTGAAGGAACAGAAAGTGGTAGTGAAAGGAAATGTTGAACCAGATACAGTTCTGAAGACAGTTTCCAAAACTGGGAAGCCAACTGCTTTTTGGGAAGGCGAAGCATCATCTGAGACTAAGTAA 231 0.4113 MSQTVVLKVGMSCEGCVGAVKRVLGKLDGVESYDIDLKEQKVVVKGNVEPDTVLKTVSKTGKPTAFWEGEASSETK* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4056 76 SUPERFAMILY HMA, heavy metal-associated domain 1 67 IPR036163 GO:0046872
Psa6g4056 76 CDD HMA 10 63 IPR006121 GO:0046872
Psa6g4056 76 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Psa6g4056 76 Gene3D - 1 65 - -
Psa6g4056 76 ProSiteProfiles Heavy-metal-associated domain profile. 3 66 IPR006121 GO:0046872
Psa6g4056 76 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 1 75 IPR045181 GO:0046872
Psa6g4056 76 PANTHER COPPER TRANSPORT PROTEIN CCH 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4056 Psa-Chr6 355079969 355083046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4056 1 76 Primary Pumps ATPases AT1G63440 25.316 4.88e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4056 K07213 - gmx:100799342 138.272