Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4054 ATGGCGAAACAAGTCTTAATCACGCTTCTTCTTCTTTTCATTTCATCAACAGAAGTGGTCGAAGGGACAAAGAAGTCATACGGGATATACGACAACAAAAACAACAACTCTGTCAAATTGTTTGTATTCGGAGATTCATATGTTGACACAGGAAATACCATGCAATCACGTTCGTATAAACCACCTTATGGAATGACATATCCTGGTAAACCTGTTGGAAGATTCAGCGACGGTCGTGTTCTCACAGATTACATCGCATCTTTTCTTAAAATCCAAACCCCAACAGCATACGTATTGAGAAACTCCTCAACTCTACAGTATGGAGTAAACTTTGCTTATGCAGGGACAGGTGTTTTCCAAACATCGGTCGATGGACCAAACATGACTGTTCAAATCGATTCATTTGAGAAACTAATCCAACAAAATGTATACACCAAACAAGACCTTGAATCGTCTGTTGCTCTTGTAAGCGCTTCTGGCAACGATTACATTGCCTTTGTAAACAAAGGAAACATTATAGACATAAAATCCTTCACCTCATCCCTTATCAATCAACTATCGATGAATGTTCAACGCATTCACGATTTGGGAATAAATAAAATCGCAATTGGATTGTTGATACCGATCGGATGTGTGCCTCGGATAACTGCAATAACTTTTCATCTTAGCTGTGTTGACATTTTGAATTTGATATCTGTAAATCACAATCAAATGCTGATCCAAACTGTCCTACAACTTAACCAGCAAGTTGGAAAATCGGTTTTTGTGACACTAGACCTCTACAATGCTTTCCTGTCAACAATTGAAACGATGCAGAAACAACAAAAAGAAAACTCAACACGGATGAATCCGTTGAAATCGTGTTGTGAGGAAGAAGGTTTAACAAATTCTTGTGGAAGTGTGGATGATAATGGAGAAAATAAATATACTTTATGTGAGAATCCAGAGCTTTCATTCTTTTGGGACAATCTTCACCCTTCTCAAAATGGTTGGCATGCTGTCTACACTCTACTGCAGTCTTCTCTCGGTCAACTTATTGATAAAAACTAA 1050 0.38 MAKQVLITLLLLFISSTEVVEGTKKSYGIYDNKNNNSVKLFVFGDSYVDTGNTMQSRSYKPPYGMTYPGKPVGRFSDGRVLTDYIASFLKIQTPTAYVLRNSSTLQYGVNFAYAGTGVFQTSVDGPNMTVQIDSFEKLIQQNVYTKQDLESSVALVSASGNDYIAFVNKGNIIDIKSFTSSLINQLSMNVQRIHDLGINKIAIGLLIPIGCVPRITAITFHLSCVDILNLISVNHNQMLIQTVLQLNQQVGKSVFVTLDLYNAFLSTIETMQKQQKENSTRMNPLKSCCEEEGLTNSCGSVDDNGENKYTLCENPELSFFWDNLHPSQNGWHAVYTLLQSSLGQLIDKN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4054 349 Pfam GDSL-like Lipase/Acylhydrolase 40 334 IPR001087 GO:0016788
Psa6g4054 349 PANTHER OSJNBB0059K02.9 PROTEIN 5 347 - -
Psa6g4054 349 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 347 - -
Psa6g4054 349 SUPERFAMILY SGNH hydrolase 37 342 - -
Psa6g4054 349 Gene3D SGNH hydrolase 31 344 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4054 Psa-Chr6 354988758 354990239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4054 32 334 Pollen Coat Proteome AT1G75930 25.982 4.15e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4054 - - gmx:100790363 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4054 6 354988758 354990239 Psa6g4054 6 354988758 354990239 ECH