Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4044 ATGGAGGAAGGGTTAGATAGAGAAGATGTTTTGAGGTCAATAAGTAGCTTAAGGATGAATATAGGATCTTCAAGTAGAAGAAGTTGGGCTTCAACAAGTGGTGGTGGTGATGATGTTTTTGAGAGAAACAAAAAGAATGAAATAGTAGTTGATGATGAACAAGAGCTCAAATGGGCAGCCATAGAAAGGCTTCCTACTTTTGAAAGACTAAGGAAAAGCATTGTGAAACAAGTTATTGAGAGTGGTGGATTTAGTTATGAAGAAGTTGATATATCAAACCTTGGTATTCATGATAAGAGTAAACTCATGGATGGTATATTGAAAAGTGTTGAACAAGATAATGAAAAGTTTCTCTTTAAGATAAGGGAAAGGATTCATAGGGTGGAGATAGAGATTCCAAAGGTGGAAGTGAGATTTGAGAAATTGCATGTTGAAGGAGATGCATTTAATGGAAGTAGATCATTACCAACACTTGTGAACTCAACCATGAATGTGATAGAGGGATTTCTTGGAGCAATGGGGGTTGTCCCTTCAAAGAAAAGTGTAATAAAAATACTTGAAGATGTTAGTGGAATTATTAAACCAGCAAGAGTAACATTGCTATTGGGACCTCCCGGATCAGGAAAAACTACTCTCCTGCAGGCACTTGCTGGCAAACTAGACAGAGATTTAAGGGTATCAGGAAAAGTCACTTATTGTGGTCATGAGTTATCAGAGTTTGTTCCTCAAAGAACATGCGCATATATCAGTCAACATAATCTTCATCATGGTGAGATGACAGTAAGAGAGACACTGGACTTTTCGGGACGATGCTTGGGAGTTGGAACAAGGCATGATCTACTTGTGGAGTTGACAAGGAGAGAAAAGCAGGCTGGATTCAAACCTGATCCAGATATAGATGCTTTCATGAAAGCCACTGCAGTCGGAGGTCAGGAAACAAGTCTCATCACAGACTATGTTCTTAAGATTCTTGGATTGGAAATGTGTTCTGATGCTTTGGTGGGAGATAATATGAGAAGGGGAATATCCGGTGGAGAAAAAAAGCGGTTAACTACAGGTGAGATGCTGGTAGGACCTGCTAAAGTTTTCTTAATGGATGAGATCTCGACCGGTCTAGATAGTTCAACAACCTTCCAGATAGTCCGATTCTTGAGGCAGCTAGTTCATATCATGGATGTCACAATGATAATCTCTCTTTTACAACCTGCGCCAGAAACATTTGATCTTTTCGACGACATAATCTTACTTTCAGAAGGTCATATTGTCTACCAAGGTCCGCGTGAAAATGTTCTCGGTTTTTTCAAGAGTGTAGGATTCAAATGTCCAGAAAGAAAAGGAGTTGCCGATTTCTTACAAGAGGTTACTTCTAGAAAGGATCAAGAGCAGTACTGGTTCATAAGAGACAAACCATACCATTATATCAGTGTCCCCGAGTTTGTAACTTACTTCAACAACTATAGCATTGGACAACAACTTACTCAAGAGCTAGAGGTTCCTTACGATCGCGCGAAAACTCATCCCGCTGCATTGGTTAAGGATAAATACGGAATCTCAAAACTCGAACTCTTCAAGGCATGTTTTGCAAGAGAGTGGCTACTGATGAAGCGAAGCGCTTTTATATACATATTTAAGACTAGTCAGATTGTGATTATGTCTTTGATTGCTATGACAGTGTTTTTTCGAACAGAAATGAAATATGGTAAACTTGAAGATGGGAGAAAATATTATGGCGCATTATTCTTCAGTTTGATTAATATAATGTTCAATGGAATGGCTGAGCTTGCAATGACTATATTTCGACTTCCGGTTTTCTTCAAGCAGAGAGATTTGTTATTTTATCCTGCTTGGGCTTTTGCACTTCCCATATGGATCCTTAGAATCCCTCTCTCTTTTCTGGAGTCAGGATTATGGGTTGTCCTTACTTATTACACTATCGGGTTTGCTCCCGCTGCAAGTAGATTTTTTCGTCAGTTTTTAGCGTTCTTCTGCATTCATCAGATGAGTTTAGCTCTGTTCCGACTCATTGCTGCTATTGGAAGAACACAAGTTGTGGCAAACACACTTGGTACCTTTATGCTGCTACTTGTTTTCTTACTTGGCGGCTTCATTATCGCCCGCGATGACATTGAACCATGGATGATATGGGGCTATTATGCTTCTCCTATGATGTATGGTCAGAATGCTATTGCCATCAATGAGTTCCTCGACGAGAGATGGAGTTCTCCCAATTTGGACCCAAGAGTACCTGAACCTACAGTTGGGAAGGCTCTTCTTAAGGCTAGAAACATGTTTACAGAAGAATATTGGTACTGGATTTGTATCGGTGCTCTCTTAGGCTTTTCCTTGCTTTTCAACATTCTTCTTATTATCGTGCTGACATTTTTGAATCCATTTGGAGATTCTAAATCCATTGTTCTGGAAGAGGAAAATGAGAAAAAGGAAACAGCAAAAGAGAGTTATGTTTCAAAAGCTAAATCATCTGAATACATTGAAATGACAGAAAGAAACACCTCAGAGAGTCTAACTCTGAAAGCAGACACTTCAACAACCAAGCGAGGAATGGTGTTACCATTTAGGCCACTATCACTTGCTTTTGATCGAGTGAGTTACTACATCAATATGCCAGCCGAAATGAAAAACCAAGGATTTGAAGAAAGTCGGCTCCAATTACTAAGAAATGTAAGTGGCGCTTTCAGACCTGGAGAATTAACAGCATTAGTAGGTGTAACTGGTGCTGGAAAAACCACACTGATGGATGTTCTTGCTGGAAGAAAAACTGGTGGTTATATTGAAGGAAACATTAGTGTATCCGGTTATCCAAAGAATCAAGCAACTTTTGCTCGAATCAGTGGATACTGTGAACAAAACGATATCCACTCTCCAAATCTTACAGTCTATGAATCTATTGTTTTTTCTGCTTGGCTACGTCTCGGTAAGGAGGTCAACAAAGAAACGCAGAAGATGTTTGTTGAGGAAGTTATGAAACTCGTGGAGTTACATCCATTAAGGAATTTTTTAGTAGGACTTCCTGGAATAGATGGTTTATCAACAGAACAAAGAAAGAGACTCACTATTGCTGTAGAATTGGTTGCCAATCCTTCTATCATCTTTATGGATGAGCCAACGTCAGGCCTTGATGCTAGAGCAGCAGCGATCGTTATGCGTACTGTCAGAAATACAGCGGATACAGGGAGAACTGTGGTCTGCACAATTCACCAACCAAGCATCGATATATTTGAATCTTTTGATGAGCTGCTTTTGATGAAAAGAGGAGGACAAATAATATACAGTGGTCCCCTTGGTCAACAATCTCAGAAGCTTGTTAAGTACTTCGAGGCTATTCCAGGAATTCCGAGAATTAAAGATGGATATAATCCTGCCACATGGATGTTGGAGATTAGTTCTCCAACAGTCGAGTCGCAGCTAAGTGTAGACTTTGCAGATTTGTTTATTAAGTCAGAATTGTATCAGACGAATCAAGAACTTATTAACGAGCTAAGCAAGCCATTACCAGGAACAAAAGATCTTAATTTTTCTTCTAAACACTCGCAGTCTTTTATTACTCAATGCAAAGCTTGCTTCTGGAAACAGCATTGGTCCTACTGGAGGAATCCTCAATATAATGCTGTCCGGTTCTTCCTGTCAATATCAGTAGGTGTTATTTTTGGCCTCGTTTTTTGGAAAAACGCAGATAAAATACACAAAGAACAAGATCTTGTGAATTTAGAGGGAGCCATGTATTCGGCTATTTTATTTCTTGGAGCCACCAACACTTCCGGAGTTCAACCTGTAGTAGCAGTAGAAAGAACAGTCTTCTACCGTGAAAAAGCGGCCGGAATGTACTCGGCTCTCCCTTATGCATTTGCACAGGTGGCAATAGAATGTATATATGTTGCAATCCAAACCTTTGTTTATAGCCTTATCCTTTACTCAATGATGGGATTCCCTTGGCAAGCTGACAAGTTCATCTGGTTCTACTACTTCATATTCATGTCATTTGTCTACTTCACACTTTATGGAATGATGACTGTGTCTCTGACACCAAACCATCAAATTGCTGCAATTGTTATGTCCTTCTTTCTAGTGTTCTGGAACATATTCTCGGGGTTCGTTATCCCCAAATCGCAAATTCCGATATGGTGGAGATGGTACTATTGGGCATGTCCAACAGCTTGGACCGTATATGGTCTAGTGACATCACAGTTGGGTGACAGAGAGACTCTAATCGAGGTACCTGGAGCTGGAACGGTATCAGTAAAAGCATACCTCAATGAAGAGATGGGCTTTGAATATGACTTCCTTGGAGTTGTTGCTGTGGCTCATATTGCTTTTGTTCTTCTGTTTCTATTTGTATTTGCTTACGCCATCAAGGTCCTTAATTTCCAGAAGCGGTAG 4395 0.3991 MEEGLDREDVLRSISSLRMNIGSSSRRSWASTSGGGDDVFERNKKNEIVVDDEQELKWAAIERLPTFERLRKSIVKQVIESGGFSYEEVDISNLGIHDKSKLMDGILKSVEQDNEKFLFKIRERIHRVEIEIPKVEVRFEKLHVEGDAFNGSRSLPTLVNSTMNVIEGFLGAMGVVPSKKSVIKILEDVSGIIKPARVTLLLGPPGSGKTTLLQALAGKLDRDLRVSGKVTYCGHELSEFVPQRTCAYISQHNLHHGEMTVRETLDFSGRCLGVGTRHDLLVELTRREKQAGFKPDPDIDAFMKATAVGGQETSLITDYVLKILGLEMCSDALVGDNMRRGISGGEKKRLTTGEMLVGPAKVFLMDEISTGLDSSTTFQIVRFLRQLVHIMDVTMIISLLQPAPETFDLFDDIILLSEGHIVYQGPRENVLGFFKSVGFKCPERKGVADFLQEVTSRKDQEQYWFIRDKPYHYISVPEFVTYFNNYSIGQQLTQELEVPYDRAKTHPAALVKDKYGISKLELFKACFAREWLLMKRSAFIYIFKTSQIVIMSLIAMTVFFRTEMKYGKLEDGRKYYGALFFSLINIMFNGMAELAMTIFRLPVFFKQRDLLFYPAWAFALPIWILRIPLSFLESGLWVVLTYYTIGFAPAASRFFRQFLAFFCIHQMSLALFRLIAAIGRTQVVANTLGTFMLLLVFLLGGFIIARDDIEPWMIWGYYASPMMYGQNAIAINEFLDERWSSPNLDPRVPEPTVGKALLKARNMFTEEYWYWICIGALLGFSLLFNILLIIVLTFLNPFGDSKSIVLEEENEKKETAKESYVSKAKSSEYIEMTERNTSESLTLKADTSTTKRGMVLPFRPLSLAFDRVSYYINMPAEMKNQGFEESRLQLLRNVSGAFRPGELTALVGVTGAGKTTLMDVLAGRKTGGYIEGNISVSGYPKNQATFARISGYCEQNDIHSPNLTVYESIVFSAWLRLGKEVNKETQKMFVEEVMKLVELHPLRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTADTGRTVVCTIHQPSIDIFESFDELLLMKRGGQIIYSGPLGQQSQKLVKYFEAIPGIPRIKDGYNPATWMLEISSPTVESQLSVDFADLFIKSELYQTNQELINELSKPLPGTKDLNFSSKHSQSFITQCKACFWKQHWSYWRNPQYNAVRFFLSISVGVIFGLVFWKNADKIHKEQDLVNLEGAMYSAILFLGATNTSGVQPVVAVERTVFYREKAAGMYSALPYAFAQVAIECIYVAIQTFVYSLILYSMMGFPWQADKFIWFYYFIFMSFVYFTLYGMMTVSLTPNHQIAAIVMSFFLVFWNIFSGFVIPKSQIPIWWRWYYWACPTAWTVYGLVTSQLGDRETLIEVPGAGTVSVKAYLNEEMGFEYDFLGVVAVAHIAFVLLFLFVFAYAIKVLNFQKR* 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4044 1464 CDD ABCG_PDR_domain2 860 1098 IPR034003 -
Psa6g4044 1464 Pfam ABC-2 type transporter 522 734 IPR013525 GO:0016020|GO:0140359
Psa6g4044 1464 Pfam ABC-2 type transporter 1188 1401 IPR013525 GO:0016020|GO:0140359
Psa6g4044 1464 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 12 1464 - -
Psa6g4044 1464 Gene3D - 877 1113 IPR027417 -
Psa6g4044 1464 Pfam ABC transporter 891 1043 IPR003439 GO:0005524
Psa6g4044 1464 Pfam ABC transporter 186 368 IPR003439 GO:0005524
Psa6g4044 1464 Gene3D - 175 471 IPR027417 -
Psa6g4044 1464 SMART AAA_5 195 420 IPR003593 -
Psa6g4044 1464 SMART AAA_5 900 1092 IPR003593 -
Psa6g4044 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 879 1102 IPR027417 -
Psa6g4044 1464 PANTHER ATP-BINDING CASSETTE TRANSPORTER 12 1464 - -
Psa6g4044 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 443 IPR027417 -
Psa6g4044 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 170 443 IPR003439 GO:0005524
Psa6g4044 1464 Pfam Plant PDR ABC transporter associated 749 805 IPR013581 -
Psa6g4044 1464 CDD ABCG_PDR_domain1 177 425 IPR034001 -
Psa6g4044 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 863 1116 IPR003439 GO:0005524
Psa6g4044 1464 Pfam ABC-2 type transporter 401 454 IPR043926 GO:0140359
Psa6g4044 1464 Pfam ABC-2 type transporter 1072 1146 IPR043926 GO:0140359
Psa6g4044 1464 Pfam ABC-transporter N-terminal 104 160 IPR029481 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4044 Psa-Chr6 352911645 352926744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4044 888 1075 Calmodulin-binding Proteins AT2G36910 27.000 2.36e-07 53.9