Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4035 ATGCTAGCAAACTTGAAAGTGCTTTTATTAAACCTACCTAAAATTTCACACTATCCTCCATTCATAAAACCATCTATCTATGTCTCCTCCATTCTTATAACAATCAACTCCACCAATTCCTTCTTTAATTTCCCCTTTCATTCCAAACCAAAAATGGCTTCTTCTCTCTTTTCATCCACTGCTTCTCTTTCCTCTCACTACCATCTCATCTTCACAGTCTTGGCCCTTCTCTTATCAGCCCTCATTTTCTTCCTCACACAGAAAACCAAATCCAAAAGCCTCAACCTTCCACCGGGTCCACCGGGATGGCCTATCGTCGGCAACCTTCTCCAAGTTGCGCGTTCCGGCAAACCATTCTTTGAGTATGTGAAAGAAATGAAAGCAAAATATGGTTCAATCTTCACACTCAAGATGGGAACAAGGACAATGATCATCCTCACGGATGCGAAACTTGCGCATGAAGCTTTGATTCAAAAGGGTGCTCTCTATGCAACTAGACCACCTGAGAATCCTACGAGGAACATCTTCAGCGCCAATAAATTCACTGTGAATGCAGCTGTTTATGGTCCTGTTTGGAAATCACTGAGAAGAAACATGGTTCAGAACATGCTGAGCTCAACTAGACTCAAAGAGTTTAGAGCTGTTAGAGAGAAATCAATGAATAAACTCATCAGTAGGCTTAGTGTTGAAGCTGAGAAGAATAATGGTGTTGTTTGGGTTCTCAAAGATGCAAGGTTTGCAGTTTTTTGCATACTTGTTGCTATGTGTTTTGGTTTAGAAATGGATGAAGAAAAACTTGAGAAAATAGATCAAGTTATGAAGAATGTTCTCATCACATTAGATCCAAGAATTGATGACTTTTTACCAATCCTAAGCATGTTTTTCTCTAAGCAGAGAAAAAGAGTTTTAGAAGTTCGAAAAGAACAAGTCGAATTCATAGTTCCTTTCATCGAACAAAGAAGAAGAGCAATTCAAAACCCTGGTTCAGATCAAACAGCTACAACATTTTCATATTTAGACACACTTTTTGATGTCAAAGTTCATGAAGGTAAAAAATCATCACCTTCTAATGAAGAATTGGTTTCACTTGTCTCAGAGTTTCTGAATGGAGGAACAGATACAACAGCAACTGCTGTTGAATGGGGAATAGCACAACTCATTGACAATCCGGAGATCCAAGAAAAACTTTATCAAGAAATTAATATGACAGTTGGAGATAAAAAAGTAGATGAAAAAGATGTTGAGAAAATGCCTTATTTACAAGCTGTGGTGAAAGAGTTGTTAAGGAAGCATCCTCCAACACACTTTGTACTAACACATGGTGTTACTGAACCTACAACATTAGGAGGGTATGATATACCAATGGATGCAAACATTGAGATTTACACAGCTGGTATAGGTGTGGATCCAAAATTGTGGCCCAACCCTGAAAAATTTGATCCTGAAAGGTTCATATCTAAGGGTGAGGAAGCTGATATAACAGGTGTTACTGGTGTGAAAATGATGCCCTTTGGTGTTGGGAGAAGGATATGTCCTGGTTTGGCTATTGGTACTGTACATATTCATTTGATGATGGCTAGGATGGTTCAGGAGTTTGAATGGAGTGCTTATCCACCAGGGAAGAAGATAGATTTCACTGGAAAGATGGAGTTTGCTGTTGTGATGAAGGACCCTTTAAGAGCAAAAATTAAGCCAAGAGGTTAA 1704 0.3885 MLANLKVLLLNLPKISHYPPFIKPSIYVSSILITINSTNSFFNFPFHSKPKMASSLFSSTASLSSHYHLIFTVLALLLSALIFFLTQKTKSKSLNLPPGPPGWPIVGNLLQVARSGKPFFEYVKEMKAKYGSIFTLKMGTRTMIILTDAKLAHEALIQKGALYATRPPENPTRNIFSANKFTVNAAVYGPVWKSLRRNMVQNMLSSTRLKEFRAVREKSMNKLISRLSVEAEKNNGVVWVLKDARFAVFCILVAMCFGLEMDEEKLEKIDQVMKNVLITLDPRIDDFLPILSMFFSKQRKRVLEVRKEQVEFIVPFIEQRRRAIQNPGSDQTATTFSYLDTLFDVKVHEGKKSSPSNEELVSLVSEFLNGGTDTTATAVEWGIAQLIDNPEIQEKLYQEINMTVGDKKVDEKDVEKMPYLQAVVKELLRKHPPTHFVLTHGVTEPTTLGGYDIPMDANIEIYTAGIGVDPKLWPNPEKFDPERFISKGEEADITGVTGVKMMPFGVGRRICPGLAIGTVHIHLMMARMVQEFEWSAYPPGKKIDFTGKMEFAVVMKDPLRAKIKPRG* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4035 567 Pfam Cytochrome P450 97 559 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS P450 superfamily signature 370 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS P450 superfamily signature 502 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PANTHER CYTOCHROME P450 77A4 59 566 - -
Psa6g4035 567 Gene3D Cytochrome P450 88 567 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 504 513 IPR017972 GO:0005506|GO:0016705
Psa6g4035 567 PRINTS E-class P450 group I signature 127 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS E-class P450 group I signature 151 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS E-class P450 group I signature 247 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS E-class P450 group I signature 359 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS E-class P450 group I signature 379 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS E-class P450 group I signature 421 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS E-class P450 group I signature 462 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS E-class P450 group I signature 501 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PRINTS E-class P450 group I signature 511 534 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g4035 567 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 59 566 - -
Psa6g4035 567 SUPERFAMILY Cytochrome P450 97 566 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4035 Psa-Chr6 352754272 352757387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4035 62 566 Cytochrome P450 AT5G04630 62.919 0.0 706