Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4034 ATGAACAACACTGACCCCTACGGTTTACCGGAGGATCTCCGCCGCCTCCTATCATCCAGAACCACCACCACCACCACCACAGAACCACCACCGTATAATCTCTATGCTTCTGCTTTTCATCCACCTAATAATTATTCTTATGACCCTTCTTCTATCATGGTTGGTGACGTTTTCTATCCTCGTAGTGCCTTCACTCACACTCACACTCACCACTATGATTATTCCTCCTCCACTCTCAACATTCCTTCAACTAGCTCCACCACTATTGCTGCTGCAACTGCTAATTCAGATCATGCTACTGCTTCTGCTGCTTTCTTTGCTGGCCTAGAAACTAATTCTGCTGATAATAAAGAATGGCTTGGTAATTTTGATTCTTGTAACAATAGATGGCCTAGACAAGAAACGCTTTCTCTTCTAGAAATCAGATCTCGTCTTGATTCTAAGTTCAAGGAGAATAATCAGAAAGCACCCTTGTGGAATGAAATTTCTAGGATAATGGCTGAGGAATTTGGGTACCAAAGAAGTGGAAAAAAATGCAAGGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAAACTAAGGAAGGTAAGGCTAGTAGACAAGATGGTAAACACTACAGATTCTTTAGGCAGCTTGAAGCAATATGTGGAGAATCAATTACAAACACTCATGCTTCAATTTCAGACAAAACCCCTCATGCTGCTTTTGTTGCTACTCAAACTCCAAGCTTCACAATCAACCAAGAAAATGTTAATGGTGTTGAGGATCATGGTTTGGTCAATAGCCTCAAGTACAAATCAGAAAGTCTAATGAGTTTCTCGAATTCGTCTGAGTTTGAGACATCCTCGTCGGAAAACAACGACGAGGATCTCTCGGCTATCGCGCACTCGATGAGGTCGTCGTCGAAGCAGAAAGGACTAGAGTTGGAGAAAAGTGAGAAGAGGGTAAGAAAAAGCTGGAGAGGTAAAGTGGAGGAGATTGTAGATTCTCACATGAAGAAGATTATAGAGACGCAAGATGCATGGATGGAGAGAATGTTGAGTGTTGTTGAACAAAGAGAACAAGAGATGGCATCAAAGGAAGAAGAAAGGAAGAGAAAAGAGTCAATGAGGTTTGATCAAGAGATACACAAACTTTGGGCTAAAGAAAAAGCTTGGGTTGAAGCAAGAGATGCTGCATTGTTAGAAGTTGTAAGAAAACATATTGGGATAGAAGGAACAAATAATAAGAATGAAAATGGTAGAAACTTTGAATACCCTTTTGGAAGTTTGGAGAATCATAGATGGACAGAAATGGAGATTTCAAGTTTGATACAACTAAGGACTAGTTATGAACATCAACTAAGAGAAAAAGGGTATTTGGAGGATGGTGTTTGGGATGATATAGGTGAAAAAATGGTGTATATGGGATTCAACAGAAATGGAGCAGAATGCAAGAAAATATGGGATGAGATTAGTGTATCTCTTAGAAGGACAGTGGACTGTGGAGTCAAAATCACAAGACCTTGGTGTTTGGGACTTAAGGTGACAGATGATGACGACATTTGA 1548 0.4012 MNNTDPYGLPEDLRRLLSSRTTTTTTTEPPPYNLYASAFHPPNNYSYDPSSIMVGDVFYPRSAFTHTHTHHYDYSSSTLNIPSTSSTTIAAATANSDHATASAAFFAGLETNSADNKEWLGNFDSCNNRWPRQETLSLLEIRSRLDSKFKENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGESITNTHASISDKTPHAAFVATQTPSFTINQENVNGVEDHGLVNSLKYKSESLMSFSNSSEFETSSSENNDEDLSAIAHSMRSSSKQKGLELEKSEKRVRKSWRGKVEEIVDSHMKKIIETQDAWMERMLSVVEQREQEMASKEEERKRKESMRFDQEIHKLWAKEKAWVEARDAALLEVVRKHIGIEGTNNKNENGRNFEYPFGSLENHRWTEMEISSLIQLRTSYEHQLREKGYLEDGVWDDIGEKMVYMGFNRNGAECKKIWDEISVSLRRTVDCGVKITRPWCLGLKVTDDDDI* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4034 515 ProSiteProfiles Myb-like domain profile. 128 187 IPR001005 -
Psa6g4034 515 CDD GT1 128 194 - -
Psa6g4034 515 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 57 496 - -
Psa6g4034 515 Coils Coil 343 370 - -
Psa6g4034 515 ProSiteProfiles Myb-like domain profile. 428 486 IPR001005 -
Psa6g4034 515 Pfam Myb/SANT-like DNA-binding domain 427 494 IPR044822 -
Psa6g4034 515 Pfam Myb/SANT-like DNA-binding domain 128 215 IPR044822 -
Psa6g4034 515 Gene3D - 130 192 - -
Psa6g4034 515 Gene3D - 429 491 - -
Psa6g4034 515 PANTHER - 57 496 - -
Psa6g4034 515 SMART sant 126 189 IPR001005 -
Psa6g4034 515 SMART sant 425 488 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4034 Psa-Chr6 351903860 351906642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4034 129 491 Trihelix Transcription Factor Family AT5G03680 41.814 1.71e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa6g4034 Myb_DNA-bind_4 7.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4034 - - gmx:100787750 526.554