Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3998 ATGGATTATGCGATTAGTGCACTGCTCTTTTTGTTGACATGCACTGTCACATACTTTAGCACTTCACTCTATGCAAGAACCAGAAATTCAAACTACAAACTTCCACCTGGACCTTCCTTTTTCACTATCATGTCGAACGTTGTTGATTTCTACAACAAACCACAACAAACACTTGCAAAATTTGCAAAGTTCTATGGTCCTGTTATGCTTATAAACCTATGCACCGAAACCACTGTCATAATCTCTTCATCTGATATGGCCAAAGAAATTCTCCACACTCATGATTCTTTGTTCTCTGATAGATCTGTTCCTCATAACACAACAACTCATAATCATAATAATTTTAGCTTAGTTTTTCTCCCATTTTCACCTCTTTGGCAACACCTTAGAAAAATATGCCATAATAATTTATTCTCTACCAAGACTCTTGACGCAAGTCAAGAGCTTAGACGAATGAAACTTAAAGATCTTCTCAATGATATGCATAAAAGCAGTTTAACCGGTGAAGCTGTTGATATTGGAAGAGCTGCTTTCAAGGCTTGCATTAATTTTTTGTCATACACTTTTGTGTCTCAAGATTTTGTTGAGTCTCTAGATGATGAATATAAGGATATAGTTTCCACTCTTCTGAAAGCTGTTGGAACACCAAACATCTCTGATCATTTCCCAGTATTGAAGATTTTTGATCCACAAGGCATTAAAAAACACACTACTAATTATGTTTCAAAGGTGTTCTATGCCTTAGATATCATAATTGACAAACGAACGAAGTTGAGAGAAAGTGAAGATTATATCTCAAACAATGACATGTTAGACACTTTGTTGGACATTTCCAAACAAGATATTCAGAAGATGGATAAAAAGCAAATTAAACATCTATTACTTGATCTGCTTGTGGCGGGAACAGATACAACAGCATATGGATTAGAAAGAGCAATGAGTGAACTAGTACGCAATCCAGAGATTATGTCAAAAGCCAAAAAGGAACTTGAGGAGATTATTGGACTAGGAAATCCAGTTGAGGAATCAGACATAGATAGGCTTCCATACTTACAAGCAGTGGTGAAAGAGAGTTTACGTTTACACCCTCCAGCTCCACTATTGCTCCCTCGAAAAGCAAGGGTAGATGTGGAAATATCAGGATACATAATTCCAAAGGGTGCTCAAGTTCTGATCAATGAATGGGCTATAGGTAGAACAGATATTTGGGAGGATGCTCATTTGTTTTCACCAGAAAGGTTTATAGGATCTGAGATAGATGTGAAAGGTAGACACTTTAAGCTGACACCATTTGGTAGTGGCAGACGTATATGTCCAGGATCACCATTGGCAGTGAGGATGTTGCATTTGATGTTGGGATCATTAATCAACTCATTTGATTGGAAACTTGAAAACAATATGGAGTTTAAGGACATGGATTTGGACAAATCTCTAAGGGCTATTCCAGTTGTACTAAACAAAGTATTATTATCTTAA 1476 0.3665 MDYAISALLFLLTCTVTYFSTSLYARTRNSNYKLPPGPSFFTIMSNVVDFYNKPQQTLAKFAKFYGPVMLINLCTETTVIISSSDMAKEILHTHDSLFSDRSVPHNTTTHNHNNFSLVFLPFSPLWQHLRKICHNNLFSTKTLDASQELRRMKLKDLLNDMHKSSLTGEAVDIGRAAFKACINFLSYTFVSQDFVESLDDEYKDIVSTLLKAVGTPNISDHFPVLKIFDPQGIKKHTTNYVSKVFYALDIIIDKRTKLRESEDYISNNDMLDTLLDISKQDIQKMDKKQIKHLLLDLLVAGTDTTAYGLERAMSELVRNPEIMSKAKKELEEIIGLGNPVEESDIDRLPYLQAVVKESLRLHPPAPLLLPRKARVDVEISGYIIPKGAQVLINEWAIGRTDIWEDAHLFSPERFIGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENNMEFKDMDLDKSLRAIPVVLNKVLLS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3998 491 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 486 - -
Psa6g3998 491 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 486 - -
Psa6g3998 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Psa6g3998 491 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 Pfam Cytochrome P450 35 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 SUPERFAMILY Cytochrome P450 35 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 Gene3D Cytochrome P450 21 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3998 491 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3998 Psa-Chr6 347351273 347353297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3998 1 483 Cytochrome P450 AT2G45550 41.584 1.81e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3998 - - gmx:100800810 659.833