Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3940 ATGGGAATAGCAATGGTTGGTACTGATTTGCTGAGTGAAAAAGCAGCCATCATGAGAGAGTCTCTTCAAAAGAGCCAAACCATTACAGACAACGTTGTCACCATTCTCGGTTCCTTTGACCACCGTCTCTCTACCCTTGAAGCCGCCATGCGTCCAACTCAGATTAGGACACATTCTATTAGACAAGCTCACGAGAATATTGATAAGACTTTGAAGGCTGCTGAGATTATATTGTCCCACTTTGATCAGTATCGTCAGGCAGAGAGCAAAATACTCAAAGGGCCACACGAAGACCTGGAAAACTATCTTGAAGCAATTGCTAAGTTGAGAAGCAACATTCAGTTTTTTGGCAGTAAGAACAGTTTTAGGAATAGTGATGGTGTTGTCAGCCATGCCAGTAGTTTGCTAACTAAAGCTATTTCTAAGCTACAGGACGAGTTTAATCAGCTATTATCATCTTACAGCAAACCCGTGGAACCCGAACGCCTCTTTGATTGCCTTCCAAACTCAATGCGACCTTCGTCAGGATCACCTGGTCACGAGGGTGAACACAATGGCAAGTCCAATCATCATTCTGATTCTCATAACAATAACGCTGATGCTGTTGTATACACACCTCCCGTCCTTATACCACCTAGAATTTTGCCACTACTACATGATTTAGCCCAGCAAATGATTGAAGCTGGTCACCGATCACAGTTACTCAAAATATACAGGGAAGCCCGTTCTAATGTATTGGAAGAAAGCCTCCAAAAACTTGGAGTTGAGAAACTCAACAAAGACGATGTTCAAAAGCTACAGTGGGAGATTTTGGAAGCCAAAATCGGAAACTGGATTCATTTCATGCGAATAGCTGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTCGCTGAACAATGTTTTGCCGAGGTGACTACAAACAGTGTCTCTATGCTACTTAGCTTTGGAGACGCAATAGCCAAAAGCAAGAGATCCCCAGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTACATTCGGAGATTGATACACTTTTTAAAGGCAAAGCTTGCACTGAAATAAGAGATGCGGCAACGGCTTTGACAAAACGGCTTGCACAAACAGCGCAGGAGACCTTTGGAGATTTTGAAGAAGCGGTTGAAAAAGATGCTACAAAGACCGCAGTAACAGATGGAACTGTTCATCCTTTGACTAGCTATGTTATTAACTATGTAAAGTTTTTGTTTGACTACCGGTCCACGTTGAAGCAACTTTTCCAAGAGTTTGAAGGTGGAAATGATTCTTCCCAGCTAGCAACTGTAACAATGCGAATAATGCAGGCTTTGCAAATCAATCTAGATGGCAAATCAAAGCAGTATAAAGACCCTGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTAGGAGGTCGGAAGCCAAGGATTTGCTTGGAGATGATTGGGTACAAAGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAATGCATGTCTATTCAGGGACTCGCCTCATCAGGTGGTGGGAGTAATACTGCAGGTGGTGATAGCGGAACTGGAGGTAGTAGTGGTGCTTCAAGAGCACTTGTTAAAGACCGGTTTAAGACATTCAATATTATGTTTGAGGAACTTCATCAGAAACAATCACAATGGACAGTTCCAGACAGCGAGTTGCGAGAGTCTCTCAGGCTTGCAGTTGCTGAAGTCTTGTTACCTGCGTATCGATCATTCGTGAAACGTTTTGGGCCTCTAGTCGAGAGTGGAAAGACGCCTCAGAAGTACATAAAATACACTGCCGAAGATCTAGATCGAATGTTAGGCGAGTTTTTTGAAGGGAAAAACATGAGTGAAACTAAGAGATGA 1956 0.4192 MGIAMVGTDLLSEKAAIMRESLQKSQTITDNVVTILGSFDHRLSTLEAAMRPTQIRTHSIRQAHENIDKTLKAAEIILSHFDQYRQAESKILKGPHEDLENYLEAIAKLRSNIQFFGSKNSFRNSDGVVSHASSLLTKAISKLQDEFNQLLSSYSKPVEPERLFDCLPNSMRPSSGSPGHEGEHNGKSNHHSDSHNNNADAVVYTPPVLIPPRILPLLHDLAQQMIEAGHRSQLLKIYREARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLAEQCFAEVTTNSVSMLLSFGDAIAKSKRSPEKLFVLLDMYEIMQELHSEIDTLFKGKACTEIRDAATALTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGNDSSQLATVTMRIMQALQINLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCMSIQGLASSGGGSNTAGGDSGTGGSSGASRALVKDRFKTFNIMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKTPQKYIKYTAEDLDRMLGEFFEGKNMSETKR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3940 651 Pfam Exo70 exocyst complex subunit 277 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa6g3940 651 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 647 - -
Psa6g3940 651 Gene3D Exocyst complex component Exo70 75 651 - -
Psa6g3940 651 MobiDBLite consensus disorder prediction 173 194 - -
Psa6g3940 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 647 IPR004140 GO:0000145|GO:0006887
Psa6g3940 651 SUPERFAMILY Cullin repeat-like 77 642 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3940 Psa-Chr6 342227099 342233576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3940 9 651 EXO70 exocyst subunit family AT5G03540 74.030 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3940 K07195 - gmx:100813987 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3940 6 342227099 342233576 Psa6g3940 6 342227099 342233576 ECH