Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3937 ATGGAGTATCACCTTTTGTTGATTCTTTGCTTTTCTACATTATTATATGTTACTTCTGCTGCATTGAATTTTGAGGGTTTATCTCTATTATCACTCTTGAGCCACTTTACTGTTGTGCCTGCTAACATAAGCTCCACATGGAATTCCTCTCATTCCACTCCATGTTTATGGAATGGAGTTCAGTGTAATCATGACCTAAATGTAATATCTATAAACCTAAGTAATTATTCACTTTTTGGTCAATTAGGACCTGAAATTGGAAATTTAGTTCACCTTGAAACCCTAGATGTGTCAATCAATGATCTCTCTGGAGAAATTCCACCACAGTTAAGCAATTGTAGTATGCTTCAGTACATTGATCTTTCTGTAAACAACTTCGGTGGTGAAATTCCACCGGAGTTGAGCAATTGTAGTATGCTTCAGTACATGGATATTTCTGTAAACAACTTCAGTGGTGAAATTCCTCAATCCTTGTTTGATATAAATCAATTGCAAGATTTGTATCTCAATAATAACAGTTTAAGTGGTTCGATCCCGGCTAGTATTGGAAACCTTACTAACCTTTACTCGTTCAATTTTGAGAGTAATCAGTTGTCAGGGGAAATTCCTGAATCCATTGGAAATTGTAGTCAATTGAGTTTCATAGTTTTGGATTCTAATAAATTGGAGGGAGTTATTCCTGAGAGTCTAAACAATCTAAAAGAACTTTCTTATTTAAGTGTCAATTTTAATAACCTTGAAGGTACCATTCAATTAGGGTTGAGAAATTGCAAAAATCTAAAATATTTGAGTCTTTCATACAATAATCTTAGTGGTGCTATACCATCGAGTTTAGGGAATTGCAGTGGTCTAGTAGAGTTCTTTGCTGCAAAGAATCAGTTACATGGTAACATACCATCAAGCTTTGGTCTGCTTCACAATCTTTCTAAGCTAGTAATTCCGGTGAATCTTTTGTCTGGGAATATACCGCCACAAATTGGTAATTGCAAGTCATTGGAAAGGTTACATTTGTATACCAATCGACTAGATGGAGAAATTCCTAGTGAATTGGGAAAATTGAGTAAGTTACGCGATCTTCGATTGTATGAAAACCTTCTGGTGGGGGAAATTCCAGTTAGCATATGGAAAATTCAAAGCCTTGAGCATGTTCTTTTGTATAATAATAGTCTCTCGGGGGAGCTACCTTTAGAGATGACTGAGCTCAAAAATCTCAAGAACATATCATTGTTTTACAACCGATTCTCTGGAGTTATACCTCAAACCTTAGGAATTAATAGCAGTTTGGTGCAGTTGGATTTTGTGTTTAACATGTTCAATGGTACGCTTCCACCAAATCTTTGTTTTGGGAAGCGATTAGCGAGGCTTAATATGGCTGGCAATCAATTTATTGGAAGGATACCTTCTGATGTAGGAAGGTGTACAAGTCTCAGAAGGGTGAGACTCGGAGGTAACTATTTTACGGGTCCTCTTCCTGATTTTGAAACGAATTCGAGTATCGGTTACATGGATATCAGCAACAACAATATCAACGGAACAATTCCATCAAGCTTGAGTAACTGCACAAATCTGTCTCTTTTAGATCTGTCCATGAACAGGTTAACGGGTTCTGTACCTTTAGAGCTTGGAAACCTTGTGAATCTCCAGAGTTTGTATCTTTCTTACAATAACTTAGAAGGTCCTTTGCCACCTCAACTGTCAAAGTGTACCAAAATGAGTAGTTTTGATGTGGGATTCAATCTCCTTAATGGTTCGTTTCCATCGAGTTTCCAGAGCTGGACAACATTAACCATTTTAATTCTCAGAGAGAATCGTTTTAGTGGGGGAATCCCAGCTTTCTTGTCGGAATTTGAAAATCTTGTTGAGTTAAAACTTGGTGGAAATAATTTTGGTGGAAATATTCCTATATCAATTGGAAAATTGCAGAATTTGCGGTATGATTTAAACCTAAGTGCTAATGGACTAGTAGGCAAGCTTCCTACAGAGATTGGAAATCTGAAGAGTCTGCTAAAACTGGATCTATCTTGGAACAATTTGACAGGAAGCGTACAACTTTTCGACGAGCTCAGTTCGTTATCCGAATTAAACATTTCATACAATTCTTTTGAAGGCTCTGTATCACAAAAACTGATGAAGTTATCGAATTCTGCTCAATCATTTTTGGGAAATCCGGGCCTGTGTGTTAGCCTTTCGTTATCCAATGCTTTGAATTTCGCAAGAAGCAGCAATTTAAGGTTATGTAATGTCGACGACACAAAATCAAAAAAGCTCAGTAAAGTTGCAATTGTAGTGATAGCATTTGGATCCTTGATACTTGCTGTACTCTTGTTAGGACTAATTTATATATTTCTAATCAGAAGGTCTAAGCAGGAAGCCATCATCGCCGAGGAAAATGATTCTTCAAACCTTCTCAAGAAAGTGATGGAAGCTACACAGAATCTAAATGATGAGTATATTATAGGCAGAGGAGCTGCAGGTGTTGTTTACAAAGCTGTAATTAGTGCAGACAAAATTTTGGCAGTGAAGAAGCTTGTCTTCGGTGAGGATGAACGAAAACGCATAAGCATGTTAAGAGAAGTTGAAACACTTTCAAAGGTTAGGCATAGAAATTTGGTGAGACTTGAACATGTTTGGTTGAGAGAGAATTATGGTCTAATCTCATACAAATACATGCCAAATGGAAGCCTTTATGACGCTTTGCACGAGAAGAATCCGTCGCAGTCCTTAAAATGGAACGTAAGGAATAAGATAGCTGTTGGAATTGCTCAGGGATTGGTTTATCTTCATTTTGACTGTGATCCTGTCATAGTTCATAGAGACATCAAAACAAGCAATATACTTTTAGATTCTGAAATGGAGCCTCATGTTACTGATTTCGGTCTTGCTAAGATTTTGCACCGATCTTCTAGTTCTACCTCATCACAGTCAATAAATGTTTCTGGCACACTTGGTTATATTGCACCAGAGAATGCTTATACAAGAGCAAAGGGTAAGGAATCTGATGTATACAGTTATGGTGTGGTTTTGCTTGAGTTGATATCAAGAAAAAAGGCAATAGATCCATCATTTATGGAAGGAATGGATATAGTTACTTGGGTGAGATCTTTGTGGGAAGAAGCAGGAGTTGTTGATGAAATTGTTGATACAGAACTTGCCAATGAAATTTCAAATTCTAATGATGTGATGAAGGAAGTAACCAAAGTGCTTTTGGTGGCTTTGAGATGTACAGAAAGTGATCCACGTAGGAGACCTACAATGAGAGATGTTATCAAGAATTTGTAG 3279 0.3711 MEYHLLLILCFSTLLYVTSAALNFEGLSLLSLLSHFTVVPANISSTWNSSHSTPCLWNGVQCNHDLNVISINLSNYSLFGQLGPEIGNLVHLETLDVSINDLSGEIPPQLSNCSMLQYIDLSVNNFGGEIPPELSNCSMLQYMDISVNNFSGEIPQSLFDINQLQDLYLNNNSLSGSIPASIGNLTNLYSFNFESNQLSGEIPESIGNCSQLSFIVLDSNKLEGVIPESLNNLKELSYLSVNFNNLEGTIQLGLRNCKNLKYLSLSYNNLSGAIPSSLGNCSGLVEFFAAKNQLHGNIPSSFGLLHNLSKLVIPVNLLSGNIPPQIGNCKSLERLHLYTNRLDGEIPSELGKLSKLRDLRLYENLLVGEIPVSIWKIQSLEHVLLYNNSLSGELPLEMTELKNLKNISLFYNRFSGVIPQTLGINSSLVQLDFVFNMFNGTLPPNLCFGKRLARLNMAGNQFIGRIPSDVGRCTSLRRVRLGGNYFTGPLPDFETNSSIGYMDISNNNINGTIPSSLSNCTNLSLLDLSMNRLTGSVPLELGNLVNLQSLYLSYNNLEGPLPPQLSKCTKMSSFDVGFNLLNGSFPSSFQSWTTLTILILRENRFSGGIPAFLSEFENLVELKLGGNNFGGNIPISIGKLQNLRYDLNLSANGLVGKLPTEIGNLKSLLKLDLSWNNLTGSVQLFDELSSLSELNISYNSFEGSVSQKLMKLSNSAQSFLGNPGLCVSLSLSNALNFARSSNLRLCNVDDTKSKKLSKVAIVVIAFGSLILAVLLLGLIYIFLIRRSKQEAIIAEENDSSNLLKKVMEATQNLNDEYIIGRGAAGVVYKAVISADKILAVKKLVFGEDERKRISMLREVETLSKVRHRNLVRLEHVWLRENYGLISYKYMPNGSLYDALHEKNPSQSLKWNVRNKIAVGIAQGLVYLHFDCDPVIVHRDIKTSNILLDSEMEPHVTDFGLAKILHRSSSSTSSQSINVSGTLGYIAPENAYTRAKGKESDVYSYGVVLLELISRKKAIDPSFMEGMDIVTWVRSLWEEAGVVDEIVDTELANEISNSNDVMKEVTKVLLVALRCTESDPRRRPTMRDVIKNL* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3937 1092 Gene3D Ribonuclease Inhibitor 320 424 IPR032675 -
Psa6g3937 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 935 947 IPR008271 GO:0004672|GO:0006468
Psa6g3937 1092 Gene3D Ribonuclease Inhibitor 137 219 IPR032675 -
Psa6g3937 1092 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1091 - -
Psa6g3937 1092 SUPERFAMILY L domain-like 67 176 - -
Psa6g3937 1092 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 3 1091 - -
Psa6g3937 1092 SUPERFAMILY RNI-like 418 711 - -
Psa6g3937 1092 Gene3D Transferase(Phosphotransferase) domain 1 890 1092 - -
Psa6g3937 1092 Pfam Protein kinase domain 816 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3937 1092 ProSiteProfiles Protein kinase domain profile. 813 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3937 1092 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Psa6g3937 1092 Gene3D Ribonuclease Inhibitor 425 734 IPR032675 -
Psa6g3937 1092 SUPERFAMILY Protein kinase-like (PK-like) 802 1091 IPR011009 -
Psa6g3937 1092 Pfam Leucine Rich Repeat 259 281 IPR001611 GO:0005515
Psa6g3937 1092 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Psa6g3937 1092 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Psa6g3937 1092 SUPERFAMILY RNI-like 154 489 - -
Psa6g3937 1092 SMART serkin_6 813 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g3937 1092 SMART LRR_typ_2 665 687 IPR003591 -
Psa6g3937 1092 SMART LRR_typ_2 257 281 IPR003591 -
Psa6g3937 1092 SMART LRR_typ_2 353 377 IPR003591 -
Psa6g3937 1092 SMART LRR_typ_2 89 113 IPR003591 -
Psa6g3937 1092 SMART LRR_typ_2 185 209 IPR003591 -
Psa6g3937 1092 SMART LRR_typ_2 544 568 IPR003591 -
Psa6g3937 1092 Gene3D Phosphorylase Kinase; domain 1 782 889 - -
Psa6g3937 1092 Gene3D Ribonuclease Inhibitor 220 319 IPR032675 -
Psa6g3937 1092 Pfam Leucine rich repeat 502 557 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3937 Psa-Chr6 342131424 342135256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3937 17 1090 Receptor kinase-like Gene Family AT1G73080 48.991 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa6g3937 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3937 - - gmx:100817655 1447.57