Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa6g3927 | ATGAAAGAGACTAATGTTCAAGGAGAAGTCTTCAAGAGTAATGGAAACACAATTTCTGTGAAAAAGTATGCACTTTCGCCTGAAGAACATAACAAGCTTATTTATGTGATACATAAAACTCTAAATGATCACAACCATGTTATTGAGGATGACAAGCTACAGTTAGTTATAAACACAATCATGAAACATTATGTAGATGTCTTCACTGTTGGTTCTACCATAACATGTGAAAGCAATCAATGGTGGATTGGAGGCTTTCGTCCTTCTCAAATTCTTCAGGTTATTCTACCTCAACTTCAACATATGTACACCCAGCAACAACTTAGTGATATTTATAATCTTGGACAATCATGTCAACAAGCAGAATATGCTCTTGCACAAGGCATGGTAAAACTAAAGCAAAATCTTGATATATCAGCAACAGCAGATGGCAAAGGGTTTCAGTTGTCGTATGTACCTCAACAACTAAGCTTCTTTAAAGAGGCTGATAATCTTCGCCAAGAATTCTTACTTCAGTTTTGTCGTCTCCTTACGATTTCTCAGCAAGCTGAATTTGTAGTTGCTCTCGAGGAACATCTGCATAATCCGCAGCCTCGGAGCTCACTGTGA | 609 | 0.376 | MKETNVQGEVFKSNGNTISVKKYALSPEEHNKLIYVIHKTLNDHNHVIEDDKLQLVINTIMKHYVDVFTVGSTITCESNQWWIGGFRPSQILQVILPQLQHMYTQQQLSDIYNLGQSCQQAEYALAQGMVKLKQNLDISATADGKGFQLSYVPQQLSFFKEADNLRQEFLLQFCRLLTISQQAEFVVALEEHLHNPQPRSSL* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa6g3927 | 202 | ProSiteProfiles | DOG1 domain profile. | 1 | 202 | IPR025422 | GO:0006351|GO:0043565 | |
| Psa6g3927 | 202 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 2 | 202 | - | - | |
| Psa6g3927 | 202 | PANTHER | FACTOR BZIP PROTEIN, PUTATIVE-RELATED | 2 | 202 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa6g3927 | Psa-Chr6 | 341721842 | 341722701 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa6g3927 | 22 | 201 | Calmodulin-binding Proteins | AT5G65210 | 37.561 | 2.91e-29 | 109 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa6g3927 | K14431 | - | mtr:MTR_1g090370 | 266.544 |