Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3907 ATGAGTATGAAAGAAGAGTTTTCCCGTGACATTGAGAGAAACCAAGAGCTTTCCCAATTCATGACGCAACAATTGCAACAAGATCAAAATAATACAGAGTCATCTACTGTCGGTAACCGCCCCACGGGGCAGCCAATTTCCTCAGTGAACAAATCCAATATGCCTATCACGGTAACAAATGTCATTCCTAATGACATTTGTTATCACGTGTTTGAGATCGCTGCTGAAGCAGACGTCTCAAAAAGCCTATTTGATTACGTTCGTCGTCGAGGGAGAGGCATAAGCATCCTTAGTGGGAATGGAGAGGTGGCACAAGTCACACTTCAGCAATCCACAGAAAAAATTGTAACCCTTCATGGACGGTTCCAAATTAATTCGATATCTGGAACAATCCCCAAATCGCCCACACGGGCAGATGTGGAAGGTTTGATTGTTAAATTGTCTGATTCTAATGGACAAGTGGTTGGAGGAAATGTAATTCCCCCTCTGGTGGCTTTCAGCCGGGTATTTTTGGTCGCTTATTCTTTTGCAGACATTGTATTTGAAAATGAGACTTTTGTGGCTTATGACAGGGATAATCAAGAAGTGGCGTGCCTCGATGAAGATGAACATGTGGCAGAAATTGATGGTAATCATTCAACATCTTCTTAG 651 0.4255 MSMKEEFSRDIERNQELSQFMTQQLQQDQNNTESSTVGNRPTGQPISSVNKSNMPITVTNVIPNDICYHVFEIAAEADVSKSLFDYVRRRGRGISILSGNGEVAQVTLQQSTEKIVTLHGRFQINSISGTIPKSPTRADVEGLIVKLSDSNGQVVGGNVIPPLVAFSRVFLVAYSFADIVFENETFVAYDRDNQEVACLDEDEHVAEIDGNHSTSS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3907 216 Pfam Plants and Prokaryotes Conserved (PCC) domain 69 177 IPR005175 -
Psa6g3907 216 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 15 185 - -
Psa6g3907 216 MobiDBLite consensus disorder prediction 21 51 - -
Psa6g3907 216 Gene3D - 68 192 - -
Psa6g3907 216 ProSiteProfiles PPC domain profile profile. 63 197 IPR005175 -
Psa6g3907 216 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 185 IPR014476 GO:0003680
Psa6g3907 216 CDD DUF296 69 165 IPR005175 -
Psa6g3907 216 SUPERFAMILY AF0104/ALDC/Ptd012-like 68 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3907 Psa-Chr6 340221490 340222444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3907 34 182 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 45.625 7.26e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3907 - - cam:101492608 140.584