Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3898 ATGACAGAGGTGAAACTGCATGGATTTTGGTATAGTCCTTTTACCTTTAGGATAGTATGGGCTCTAAATCTGAAGGGTATATCATACGAGCACATAGAAGAAGATCGTTTCAATAAGAGTCCTCAACTTCTTCAATATAACCCAGTATATAAAAAGATTCCAGTGCTAGTTCATGATGGAAAACCCATATGTGAATCCATGCTCATTGTTGAATACATTGATGAAATATGGCCACACAACTCATTGCTACCTGTTGATCCCTATGACAGAGCTCAAGCCCGGTTTTGGGTTAAATACGTTGATGAGCTGTTTCTGGCAATTGCGGCCCACCTTGATAGCAGAAGTGATGAAGAACGAGAGAAGGCCAAAGAGAATATATGGGAAGGACTCAGAGTTGTTGAGGATCAGTGTTTGGGAGATCAGAGGAAATTCTATGGGGGAGACACCATTAGCATTGTAGACATAGCTCTTGGATCTTTTGTCAAAGTTATTGACGTTCAAGAGGATATGTTTGAAGTGAAGATCTTGCAAAGTGAGAGGTTCCCTCGCTTGAAATTATGGTTTAATAATTTCAAGGATGTTCCAATCATCAAAGAAAGCACCCCTAGTAAAGAGAAATTGGTTGCTCTTTTAAAGCCTCTTATTGAACAAATCTTGGCGAGGAAATGA 669 0.3961 MTEVKLHGFWYSPFTFRIVWALNLKGISYEHIEEDRFNKSPQLLQYNPVYKKIPVLVHDGKPICESMLIVEYIDEIWPHNSLLPVDPYDRAQARFWVKYVDELFLAIAAHLDSRSDEEREKAKENIWEGLRVVEDQCLGDQRKFYGGDTISIVDIALGSFVKVIDVQEDMFEVKILQSERFPRLKLWFNNFKDVPIIKESTPSKEKLVALLKPLIEQILARK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3898 222 CDD GST_N_Tau 4 77 - -
Psa6g3898 222 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Psa6g3898 222 Gene3D - 83 220 - -
Psa6g3898 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Psa6g3898 222 SFLD Main (cytGST) 1 220 - -
Psa6g3898 222 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Psa6g3898 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
Psa6g3898 222 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Psa6g3898 222 SUPERFAMILY GST C-terminal domain-like 75 216 IPR036282 -
Psa6g3898 222 Pfam Glutathione S-transferase, C-terminal domain 117 188 - -
Psa6g3898 222 Gene3D Glutaredoxin 1 82 - -
Psa6g3898 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Psa6g3898 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 217 - -
Psa6g3898 222 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3898 Psa-Chr6 339655476 339662407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3898 4 221 Glutathione S-transferase Gene Family AT3G09270 45.455 4.14e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3898 K00799 - gmx:547584 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3898 6 339655476 339662407 Psa6g3898 6 339655476 339662407 ECH