Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3859 ATGAATATCTGGCAGGTTTTTGCCAAAGGTGTGGCAAGGATTTGGTTGTACTTATGGCTGCAAGAGCATCAAGGATGGAGAACCAAGATGCAATTGATTGCGCAATCGTTCAATGTTGCAGACACAAAGGAGGCACGAGCTGGAATAAAAGAAGTTCATTTCCTTCCGTTTAATCCAACTGATAAAAGAACTGCCCTTACATACATTGATGGTGCTGATCTCAATCTTGCACAAAACAAGGCAGAAATCGAACGAAAGGTTCATGCGATGATTGACAAGTTTGCAGAACGTGGACTTCGTTCTCTGGGATTGCAAGACAGTACCGGAGGAAGTAAGGAAAGTGCAGGAGGACCATGGGTTTGTGCCTCTCCTCCCTCTTTTGACCCTCCGAGACATGATAGGCAGAAACAATCAGAAGAGGCTCTTGATCTTGGCGTTAGTGTCAAAATATCACT 455 0.444 MNIWQVFAKGVARIWLYLWLQEHQGWRTKMQLIAQSFNVADTKEARAGIKEVHFLPFNPTDKRTALTYIDGADLNLAQNKAEIERKVHAMIDKFAERGLRSLGLQDSTGGSKESAGGPWVCASPPSFDPPRHDRQKQSEEALDLGVSVKIS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3859 151 Gene3D - 15 127 IPR023299 GO:0000166
Psa6g3859 151 MobiDBLite consensus disorder prediction 102 151 - -
Psa6g3859 151 Gene3D - 128 150 IPR023214 -
Psa6g3859 151 PANTHER CALCIUM-TRANSPORTING ATPASE 38 150 - -
Psa6g3859 151 PANTHER PLASMA MEMBRANE ATPASE 38 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3859 Psa-Chr6 336474911 336475655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3859 2 150 Primary Pumps ATPases AT5G62670 53.012 2.35e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3859 K01535 - vvi:100246249 152.91