Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3857 ATGAAGAACAAATATTCACTAGTAGCTTGCATGATACTCTTAAGCTTCCTCCTTGTTTGTCAAGGAAGCAGCCTTACCAAGGATTTTTACCGGCATTCCTGCCCTCAAGCCGCCGACATAATTAAGAACAAAACCCTGCAGCATGTCACTGCTAATCCCGTCTTACCTGCTAAGTTGCTTAGAATGCATTTTCATGACTGTTTCGTCAGGTTTGACAAACCTATGTGGGAAGTACTCACTGGTAGAAGAGACGGTACAGTATCGAAAAGTAGCGAAGCCTTGGCCAATATCCCGGGACCTAACTTCAATTTCACCCAACTCATACAAAACTTTGCAAGTAAAGGTCTCACCCTGCATGATCTTGTTGTATTATCAGGAGCACACACAATTGGAATAGGCCACTGCAACGCCTTCAGTAACAGGCTTTATAATTTCACGGGAAAAGGCGATCAAGACCCTTCTTTGAATTCGACATATGCTGCATTCTTGAAGACTAAATGTAAGAGTCTGAGTGACAACACAACAAGGGTGGAGATGGATCCTGGAAGCTCTAGGACTTTCGACAGTGACTATTATCCTAACCTTCTTCAGAAAAAGGGTCTGTTTCAATCAGATGCCGCTCTTCTAACACAAGATCAGTCAACAGGTATTGTGGAAGAGTTGGTTAACCAAAACAAGTTCTTCACGGAGTTTGCACAGTCGATGAAGAGGATGGGAGCCGTTGATATTCTCACAGGCTCTGCTGGGGAAATTCGGATCAAGTGTTCCATTGTCAACTGA 780 0.4359 MKNKYSLVACMILLSFLLVCQGSSLTKDFYRHSCPQAADIIKNKTLQHVTANPVLPAKLLRMHFHDCFVRFDKPMWEVLTGRRDGTVSKSSEALANIPGPNFNFTQLIQNFASKGLTLHDLVVLSGAHTIGIGHCNAFSNRLYNFTGKGDQDPSLNSTYAAFLKTKCKSLSDNTTRVEMDPGSSRTFDSDYYPNLLQKKGLFQSDAALLTQDQSTGIVEELVNQNKFFTEFAQSMKRMGAVDILTGSAGEIRIKCSIVN* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3857 259 Gene3D - 73 259 - -
Psa6g3857 259 CDD secretory_peroxidase 25 258 IPR033905 GO:0004601|GO:0042744
Psa6g3857 259 Gene3D Peroxidase, domain 2 98 238 - -
Psa6g3857 259 ProSiteProfiles Plant heme peroxidase family profile. 57 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g3857 259 PANTHER PEROXIDASE 6 70 - -
Psa6g3857 259 PANTHER PEROXIDASE 72 258 - -
Psa6g3857 259 Pfam Peroxidase 74 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g3857 259 ProSitePatterns Peroxidases proximal heme-ligand signature. 120 130 IPR019793 -
Psa6g3857 259 SUPERFAMILY Heme-dependent peroxidases 25 259 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa6g3857 259 PANTHER PEROXIDASE 25-RELATED 6 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g3857 259 PANTHER PEROXIDASE 25-RELATED 72 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g3857 259 Gene3D - 25 72 - -
Psa6g3857 259 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g3857 259 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g3857 259 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3857 Psa-Chr6 335875220 335876598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3857 1 259 Peroxidase AT1G05260 45.487 1.51e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3857 K00430 - gmx:100799691 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0599 3 53654216 53655648 Psa6g3857 6 335875220 335876598 PCT