Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3855 ATGGGTTCGAAACCGTGGCTACATCCTGCTCCAACTTATACACCTATCGAAAGTTTTTGGGATACTGATGAAGATGCTCCCGGTCCTCGCTGTGGACATACTCTTACCGCGGTTGCCGCTACTAAGACTCATGGTCCGCGGTTGATTCTGTTTGGTGGTGCAACTGCCATTGAAGGAGGATCCACTTCTGCTCCTGGCATTAGATTAGCTGGAGTTACGAATTCGGTTCATTCGTATGACGTTGAGACCAAAAAATGGACTAGGATTAAACCTGCTGGAGACCCGCCGTCTCCTCGGGCTGCTCATGCTGCAGCGACGGTTGGGACCATGGTTGTTTTTCAGGGTGGGATAGGTCCTGCCGGGCATTCCACCGATGATCTGTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGAGTCGTTGTACAAGGGCAGGGACCGGGGCCTCGCTACGGCCATGTAATGGACTTGGTTGCTCAGAGATATCTTGTTACCGTCAGCGGAAATGATGGAAAACGAGTTGTATCTGATGCTTGGACTTTAGATACGGCTCAAAAGCCTTATGCGTGGCAGAAGCTGAACCCAGAAGGCGACAGGCCTTCTGCTAGAATGTATGCGACTGCTAGTGCCCGCACAGATGGAATGTTTTTACTCTGTGGTGGAAGAGACTCTTCTGGAACTCCACTAGCAGACGCCTATGGACTACTCATGCATAGAAATGGCCAGTGGGAATGGACTCTTGCACCTGGAGTTTCCCCTTCACCTAGGTATCAACATGCATCGGTTTTTGTTGGTGCACGATTACATGTTACAGGAGGTGTTCTTAGGGGTGGGCGAGCTGTGGAAGGTGAACCATCCATTGCAGTATTGGATACTGCTGCCGGGGTTTGGTTGGATAGAAATGGCATTGTGTCCTCATCACGCTCAAACAAAGGTCATGATTATGACCCTTCTTTGGAGCTTATGCGTCGTTGTCGTCATGCAGCAGCAGCTGTTGGTGTTCGAGTCTATATCCATGGTGGTCTTAGAGGAGATACACTACTGGGTGATTTCTTAATGGCTGAAAATTCGCCACCAGGTTCACCTTTTGCTAGTCCCAAACTTAATCAGCCTAACTTAAATTATAATGGAGACACACCAAGTTTGGATGATGGACCAGAAACCCCGTCATTTGGTGGCCCAGGCTTGGACAAATATTCTCTGGAGAAACTGAGGGAGGCATCAGCTGCTGAAGCTGAGGCAGCTAGTGCTGTTTGGCAATCTGTGCAAGCTATATCAAGTAGTCCCGCTGATGAAACATCTGTGTCAGATGACAACTCACATGCTGCAGACACAGTTGCAGATGGAAGTGACACAGAGGGAGATGTTCACCTTCATCCTAGAGCTGTTGTAGTTGCTAAAGAGGCTATAGGTAACCTAGGTGGAATGGTGAGACAATTGTCACTCGATCAATTTGAAAATGAAAGCAGACGCATGCTTCCCATAAACAGTGATTCACCATATCCTACAAAAAAGTTCACCAGGCAGAAATCCCCTCAGGGTTTACATAAAAAGATAATTTCAAATTTGCTCAGGCCTCGCAACTGGAAAGCGCCTGCAAATAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTTTGCTATGCTGCTGAGCAAATATTTATGCACGAACCAACTGTTCTTCAGCTGAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCAACCGCAGGAGACATCACGTATATTGACTACCTGTTTTTAGGAGATTATGTTGACCGAGGACAGCACAGCTTGGAAACCATTACCTTACTACTTGCTCTTAAGATTGAATATCCTGACAATGTTCACTTGATACGTGGAAATCATGAAGCTGCTGACATAAATGCATTATTTGGTTTTCGTATAGAGTGCATTGAACGAATGGGTGAAAATGACGGCATATGGGCGTGGACAAGATTCAATCAACTTTTTAACCATCTTCCACTCGCTGCTCTTATTGAAAAGAAAATTATATGTATGCATGGTGGCATTGGAAGATCTATCCATTCAGTAGAACAGATAGAGAAGATTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGATCTTTTATGGTCTGATCCCACAGAAAATGATAGTGTGGAGGGTTTGAGACCAAATGCTAGAGGGCCAGGGCTCGTCACTTTCGGGCCTGACCGTGTGACAGAATTCTGTAAGAAAAATAAATTACAGCTCATCATAAGGGCCCATGAGTGTGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAATTAATCACGCTTTTTTCTGCAACTAACTATTGTGGAACTGCAAACAATGCGGGAGCTATACTGGTGGTTGGCAGGGGTTTGGTCGTGGTTCCAAAATTAATTCATCCTATACCTCCTCCTCTTCAGTCACCAGAGTCATCTCCTGAGCGTGTCATGGACGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTCGTGGTCGACCACAGCCTGACCTTGACCGCGGTTCCCTAGCGTATATATGA 2619 0.4601 MGSKPWLHPAPTYTPIESFWDTDEDAPGPRCGHTLTAVAATKTHGPRLILFGGATAIEGGSTSAPGIRLAGVTNSVHSYDVETKKWTRIKPAGDPPSPRAAHAAATVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWTLDTAQKPYAWQKLNPEGDRPSARMYATASARTDGMFLLCGGRDSSGTPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHASVFVGARLHVTGGVLRGGRAVEGEPSIAVLDTAAGVWLDRNGIVSSSRSNKGHDYDPSLELMRRCRHAAAAVGVRVYIHGGLRGDTLLGDFLMAENSPPGSPFASPKLNQPNLNYNGDTPSLDDGPETPSFGGPGLDKYSLEKLREASAAEAEAASAVWQSVQAISSSPADETSVSDDNSHAADTVADGSDTEGDVHLHPRAVVVAKEAIGNLGGMVRQLSLDQFENESRRMLPINSDSPYPTKKFTRQKSPQGLHKKIISNLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPDNVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNHLPLAALIEKKIICMHGGIGRSIHSVEQIEKIERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPLQSPESSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3855 872 Gene3D - 4 194 IPR015915 GO:0005515
Psa6g3855 872 SUPERFAMILY Metallo-dependent phosphatases 523 832 IPR029052 -
Psa6g3855 872 MobiDBLite consensus disorder prediction 847 872 - -
Psa6g3855 872 SMART pp2a_7 541 825 IPR006186 GO:0016787
Psa6g3855 872 MobiDBLite consensus disorder prediction 431 448 - -
Psa6g3855 872 Pfam Calcineurin-like phosphoesterase 569 776 IPR004843 GO:0016787
Psa6g3855 872 ProSitePatterns Serine/threonine specific protein phosphatases signature. 638 643 IPR006186 GO:0016787
Psa6g3855 872 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 872 - -
Psa6g3855 872 PIRSF STPPP_BSU1 1 872 IPR012391 GO:0004721|GO:0009742
Psa6g3855 872 MobiDBLite consensus disorder prediction 431 457 - -
Psa6g3855 872 Pfam Serine-threonine protein phosphatase N-terminal domain 520 567 IPR031675 -
Psa6g3855 872 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 872 - -
Psa6g3855 872 Gene3D - 195 358 IPR015915 GO:0005515
Psa6g3855 872 SUPERFAMILY Kelch motif 73 356 IPR015915 GO:0005515
Psa6g3855 872 Pfam Galactose oxidase, central domain 115 155 - -
Psa6g3855 872 Pfam Galactose oxidase, central domain 45 105 - -
Psa6g3855 872 PRINTS Serine/threonine phosphatase family signature 569 596 IPR006186 GO:0016787
Psa6g3855 872 PRINTS Serine/threonine phosphatase family signature 604 631 IPR006186 GO:0016787
Psa6g3855 872 PRINTS Serine/threonine phosphatase family signature 637 661 IPR006186 GO:0016787
Psa6g3855 872 PRINTS Serine/threonine phosphatase family signature 675 701 IPR006186 GO:0016787
Psa6g3855 872 PRINTS Serine/threonine phosphatase family signature 705 732 IPR006186 GO:0016787
Psa6g3855 872 PRINTS Serine/threonine phosphatase family signature 765 785 IPR006186 GO:0016787
Psa6g3855 872 PRINTS Serine/threonine phosphatase family signature 787 803 IPR006186 GO:0016787
Psa6g3855 872 Gene3D - 503 842 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3855 Psa-Chr6 335856562 335867589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3855 570 768 Calmodulin-binding Proteins AT5G63870 33.043 4.32e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3855 K01090 - gmx:100805538 1602.8