Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3811 ATGGTCAGAAAAATATCATACCTTACCTTACTGCTTGCACTTTTATTTCTTTCATTCCTTGCAAATACTTGCCAGTTGGCATTTGCAAAAGGGACAGACAATATCAGAGAAGCTTGCAGAGTAACTAGGTATCAAAACCTTTGTATGCGTTCGCTAGCACCATTCTCTAGCAGTGCTGGAAGAAGCCCTAGTAAGTGGGCAAGGGCAGGAGTGTCGGTTACTATCGCAGAGGTTAAGAATGTTCAAGCATATCTGTCAAGCTTCAAGAGGCGCGAGCATTTAAGAGGAAGAAACAAAGTTGCACTTTTAGATTGTGTTGAGACTTTTGCAGATGCCATTGACGATCTTCATAGGTCACTGAATGTGCTCAGAAGGCTTAGCAGAAGCACATTTAGTACCCAGATGGGGGACCTTAATACATGGTTAAGTGCAGCACTTACAAATGAAGATACTTGCCTTGATGGGTTTCAAGGCAAAAATGATAGGAAAATCAAATCGCTGCTAAATAAGGTTCACAAAGTTTATTATGTAACCAGTAATACTCTAGCTCTTGTCAACAAACTTGCTACTACAGGTCTAGGAAGCATTTCTGATCCATAG 600 0.4083 MVRKISYLTLLLALLFLSFLANTCQLAFAKGTDNIREACRVTRYQNLCMRSLAPFSSSAGRSPSKWARAGVSVTIAEVKNVQAYLSSFKRREHLRGRNKVALLDCVETFADAIDDLHRSLNVLRRLSRSTFSTQMGDLNTWLSAALTNEDTCLDGFQGKNDRKIKSLLNKVHKVYYVTSNTLALVNKLATTGLGSISDP* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3811 199 CDD PMEI-like_3 38 190 - -
Psa6g3811 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 188 IPR035513 -
Psa6g3811 199 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 188 IPR006501 GO:0004857
Psa6g3811 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 21 183 - -
Psa6g3811 199 SMART PMEI_2 30 184 IPR006501 GO:0004857
Psa6g3811 199 Pfam Plant invertase/pectin methylesterase inhibitor 34 184 IPR006501 GO:0004857
Psa6g3811 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 190 IPR035513 -
Psa6g3811 199 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 21 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3811 Psa-Chr6 330725809 330726408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3811 35 193 Carbohydrate Esterase AT3G14310 33.129 5.34e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3811 - - gmx:100791264 235.728