Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3757 ATGAAGGAAGCCAAGAGGAAGGGTCGTCATTCTGGATATGGTAAGCGCAAGGGTACAAGAGAGGCAAGCCCTCCCCACCAAGATTCTATGGATGAGGAGGATGCGTGTCCTCAGGCGTTACTACGCAAGTACGAGAAGCAAAGAAAATTGAACAAGCACATTCCCAAGGCTGAGAAGGCAGAGAGAAGACATTGTCTGATCAGTTTGAGGCCAAGAGGGCTAAGAACAAGGCTAGCAGGGAAAGGAAACATGCCCGAAGAAGAAGAGCGCTTTGCTCAAGGTCCTGGAGAAAAAGGCACCTACAGCACCAGTGGCACCAGCTGCAACCAGCAACCCAGCCTGCCCAACCATCAAAGAACATCCGAAGAAGTAGATCAAGTATTCATTTGA 390 0.4974 MKEAKRKGRHSGYGKRKGTREASPPHQDSMDEEDACPQALLRKYEKQRKLNKHIPKAEKAERRHCLISLRPRGLRTRLAGKGNMPEEEERFAQGPGEKGTYSTSGTSCNQQPSLPNHQRTSEEVDQVFI* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3757 129 MobiDBLite consensus disorder prediction 1 40 - -
Psa6g3757 129 MobiDBLite consensus disorder prediction 15 40 - -
Psa6g3757 129 Gene3D - 1 88 - -
Psa6g3757 129 Pfam Ribosomal protein L19e 2 53 IPR000196 GO:0003735|GO:0005840|GO:0006412
Psa6g3757 129 SUPERFAMILY Ribosomal protein L19 (L19e) 2 54 IPR035970 GO:0003735|GO:0005840|GO:0006412
Psa6g3757 129 MobiDBLite consensus disorder prediction 97 129 - -
Psa6g3757 129 MobiDBLite consensus disorder prediction 78 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3757 Psa-Chr6 326744867 326745645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3757 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 31.655 1.90e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3757 K02885 - gmx:100527501 77.7962