Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3754 ATGGCGGCATTTTCGTTTTCAGTCGCGTCTGTTGTTGAGGATGTTCTTCAACAACATGGCACTCGTCTCAAAGATCTTGATTTGGAATCTAGAAAATCGGAAGAAGCTGCATTGAGAAGATATGAAGCCGCGGGGTGGTTGAGGAGAATGGTTGGAGTTGTTGCAGCTAAGGATTTACCGGCGGAGCCTTCTGAGGAAGAGTTTAGGCTTGGTTTGAGGAGTGGGATCATTCTTTGTAATGTTATTAACAAGGTTCAACCTGGTGCTGTATGTAAGGTTGTGGAGAGTCCGGTTGATTCTGGGCTAATCCCTGATGGAGCACCGTTATCAGCATTCCAGTATTTTGAAAATGTTAGGAACTTTCTAGTGGCTGTTCAGGAAATTGGAATTCCTACCTTTGAGGCTTCTGATCTAGAACAAGGAGGAAAATCATCGAGGATTGTGAATAGTGTATTGGCCCTTAAATCCTATAGTGAATGGAAACAAACTGGGGCTAATGGTGTGTGGAAATTTGGTGGAACTATCAAACCTGCGAGCACTGCAAAATCTTTTGTGAGAAAAAACTCTGAGCCATTTACCAATTCCTTGTCAAGAACCTCTTCAACAAATGAAAAATCTATGACTTCTCTTACCTCTGATGTCGAGTCTAATAAAATGTCTAGTTCTCATTCTTTAGGTATGCTTGTTCGTGCAATGCTATTCGATAAGAAGCCGGAAGAAGTTCCAACGTTGGTTGAATCTGTTTTGACTAAAGTCGTAGAGGAGTTTGAGCATCGCATTGCAAGCCAGGATGAACAGACAAAAACAACTTCAAGAGGATCGTTACCTCAAAGCGATGGACCTTTAGCAAAGTTTACTATGGCACGTAAAAAGGTGGATAACAAGAATCTCATGGTTACAAAGAAAGAGGAGGTCATCCATAAAAACCATGTTGCTGATGAGGAATCACAGAAAAAAGCTCTGAAGCAGCAAATGCTCTTTGATCAACGGCAAAGAGATATTCAAGAATTGAAATATACAGTTCAAACAACCAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAATTCTCCAATTTAGGCATGCACATTCATGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATACAATGAAGTCCAGGATCTTAAGGGAAGTATTAGGGTGTACTGTCGAGTAAGACCTTTCTTATCTGGACAACCAAATCATTTGAGTACCGTGGAGAACATAGAAGATGGAGTTATCACGATTAATGTTCCCTCAAAGAATGGGAAAGCACGCAGATCCTTCAACTTCAACAAAGTTTTTGGACCATCCGCGGCCCAAGGGGAGGTCTTCGCTGATATGCAGCCACTCATTAGGTCCGTTCTTGATGGTTTTAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTTCACCATGACTGGACCAAAAGAGATCACAGAAAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATCTGTTTTTTACCGCGAATCAAAGAAAGGACACTTTTCGCTATGATGTTTCTGTTCAAATGATTGAAATTTATAATGAGCAAGTCAGAGATCTATTGACTACCGATGGATCAAACAAAAGATTAGAAATTCGTAGTAACTCTCAAAGAGGGCTTAGTGTACCAGATGCAAGCCTTGTCCAAGTATCATCAACAAATGATGTTATTGAACTAATGAACCTGGGCCATAAGAACCGTGCTGTTGGAGCAACAGCACTTAATGACCGTAGTAGCCGATCTCACAGTTGTTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCCGGAGCTGTCCTACGGGGATGCATGCATCTGGTTGACTTGGCAGGAAGTGAGAGGGTCGACAAATCCGAGGCGACAGGTGATAGACTGAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCGTTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCTTATAGAAATAGCAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGACATTAATGTTTGTTCACATTAGTCCAGAGGCCAATGCTATTGGAGAAACAATTAGCACACTAAAATTTGCAGAGAGAGTTGCTACGGTTGAACTTGGCGCTGCTCGAGTAAACAAGGATGGGGCAGATGTCAAAGACCTCAAAGAACAGATTGCCAACCTTAAGGCGGCGTTGGCTAGAAATGAAGGAAATTCAGAATATTCCTTGCCCGGCAGCTCTGGAAAATATAGGACAACAGCTAGCGAACTATCACCCTATCGTGCAGTTCAGCGAGGTGCGGATGTTGTGGATGATCCCTTTGGATGCCGGCAACCCATGGTTGATGTAGGCAACTTAGCGGTATACATACTCTTTTTGTTCATTGTTATCTGA 2445 0.4204 MAAFSFSVASVVEDVLQQHGTRLKDLDLESRKSEEAALRRYEAAGWLRRMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQPGAVCKVVESPVDSGLIPDGAPLSAFQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSSRIVNSVLALKSYSEWKQTGANGVWKFGGTIKPASTAKSFVRKNSEPFTNSLSRTSSTNEKSMTSLTSDVESNKMSSSHSLGMLVRAMLFDKKPEEVPTLVESVLTKVVEEFEHRIASQDEQTKTTSRGSLPQSDGPLAKFTMARKKVDNKNLMVTKKEEVIHKNHVADEESQKKALKQQMLFDQRQRDIQELKYTVQTTKAGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFLSGQPNHLSTVENIEDGVITINVPSKNGKARRSFNFNKVFGPSAAQGEVFADMQPLIRSVLDGFNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRALSDLFFTANQRKDTFRYDVSVQMIEIYNEQVRDLLTTDGSNKRLEIRSNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVVASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEANAIGETISTLKFAERVATVELGAARVNKDGADVKDLKEQIANLKAALARNEGNSEYSLPGSSGKYRTTASELSPYRAVQRGADVVDDPFGCRQPMVDVGNLAVYILFLFIVI* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3754 814 Coils Coil 728 755 - -
Psa6g3754 814 PRINTS Kinesin heavy chain signature 469 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3754 814 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3754 814 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3754 814 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3754 814 MobiDBLite consensus disorder prediction 260 280 - -
Psa6g3754 814 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Psa6g3754 814 SMART kinesin_4 394 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3754 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 753 IPR027417 -
Psa6g3754 814 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 790 - -
Psa6g3754 814 SMART ch_5 39 157 IPR001715 GO:0005515
Psa6g3754 814 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 790 - -
Psa6g3754 814 SUPERFAMILY Calponin-homology domain, CH-domain 41 170 IPR036872 -
Psa6g3754 814 Pfam Calponin homology (CH) domain 40 159 IPR001715 GO:0005515
Psa6g3754 814 Pfam Kinesin motor domain 402 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3754 814 MobiDBLite consensus disorder prediction 192 218 - -
Psa6g3754 814 CDD KISc_C_terminal 394 723 - -
Psa6g3754 814 Gene3D - 24 182 IPR036872 -
Psa6g3754 814 Gene3D Kinesin motor domain 391 760 IPR036961 -
Psa6g3754 814 ProSiteProfiles Kinesin motor domain profile. 396 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3754 Psa-Chr6 326710313 326717390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3754 384 721 Calmodulin-binding Proteins AT5G65930 42.151 3.44e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3754 K10406 - gmx:100801279 1355.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3754 6 326710313 326717390 Psa6g3754 6 326710313 326717390 ECH
Psa3g0497 3 47145360 47151800 Psa6g3754 6 326710313 326717390 ECH
Psa3g0497 3 47145360 47151800 Psa6g3754 6 326710313 326717390 PCT