Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3753 ATGCCACCGCGAGGTGTTCTTTGCAATGCCGGTGCTGGTGCTGCCGCTGGGGTTATTGCTGCCACCTTTGTATGTCCTTTAGATGTAATCAAAACTAGGTTTCAGGTTGGGACTCAGCATGCTAATAGAAGTGTTAGAGGTAGTCTTATAGTTGGTAGTTTGGAGCAAATATATCATAAGGAGGGGTTGCGAGGATTGTACCGCGGGCTATCCCCAACTGTTATGGTCTTACTTCCAAACTGGGCTGTCTATTTTACTGTGTACGAGCAGCTCAAGAAGCTGCTTTCTGATGATGAAAACCACCACCTTTCAGTTGGAGCTAATATGGTAGCTGCTTCAGGTGCTGGAGCTGCAACTACATTGGTTACAAATCCATTTTGGGTTGTCAAGACAAGACTCCAAACCCAGGGAATGAGATCCGGTGTCCTGCCGTATAGAAGTACCCTATCTGCTTTGAAGAAAATAGCTCACGAGGAGGGCATTCGTGGGATGTACAGCGGCCTTGTGCCTGCTCTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCAATATATGAGAAAATAAAATGTTATTTAGCAAATCGAGATAACACAACAGTGGATAAACTCGGTGCACGGGATGTGGCAATTGCCTCATCAATTTCCAAATTTTTTGCATCTACATTGACATATCCTCATGAGGTTGTTCGATCAAGACTGCAAGAACAAGGACCTTACTCAGAAAAGCGGTACTCTGGTATGAGCGACTGCATTAGAAAGGTATTTCAACAAGAGGGACTCCCTGGTTTTTACCGAGGATGTGCCACCAACCTCCTGAGGACAACCCCAGCTGCTGTAATCACATTCACCAGTTTTGAAATGATACACCGTTTTCTAGTTTCACTTTCCCCTTCTGACCCAGAGCTGCATAATTTGTAA 918 0.4521 MPPRGVLCNAGAGAAAGVIAATFVCPLDVIKTRFQVGTQHANRSVRGSLIVGSLEQIYHKEGLRGLYRGLSPTVMVLLPNWAVYFTVYEQLKKLLSDDENHHLSVGANMVAASGAGAATTLVTNPFWVVKTRLQTQGMRSGVLPYRSTLSALKKIAHEEGIRGMYSGLVPALAGISHVAIQFPIYEKIKCYLANRDNTTVDKLGARDVAIASSISKFFASTLTYPHEVVRSRLQEQGPYSEKRYSGMSDCIRKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSLSPSDPELHNL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3753 305 PRINTS Mitochondrial carrier protein signature 9 22 IPR002067 GO:0055085
Psa6g3753 305 PRINTS Mitochondrial carrier protein signature 22 36 IPR002067 GO:0055085
Psa6g3753 305 PRINTS Mitochondrial carrier protein signature 69 89 IPR002067 GO:0055085
Psa6g3753 305 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Psa6g3753 305 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Psa6g3753 305 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 3 304 - -
Psa6g3753 305 SUPERFAMILY Mitochondrial carrier 6 287 IPR023395 -
Psa6g3753 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 191 IPR018108 -
Psa6g3753 305 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 3 304 IPR044712 GO:0006862|GO:0055085
Psa6g3753 305 Pfam Mitochondrial carrier protein 6 97 IPR018108 -
Psa6g3753 305 Pfam Mitochondrial carrier protein 209 293 IPR018108 -
Psa6g3753 305 Pfam Mitochondrial carrier protein 102 194 IPR018108 -
Psa6g3753 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 94 IPR018108 -
Psa6g3753 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 291 IPR018108 -
Psa6g3753 305 Gene3D Mitochondrial carrier domain 98 297 IPR023395 -
Psa6g3753 305 Gene3D Mitochondrial carrier domain 2 97 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3753 Psa-Chr6 326618373 326625174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3753 2 299 Chloroplast and Mitochondria Gene Families AT2G47490 74.172 5.57e-152 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3753 K15115 - jre:108994143 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3753 6 326618373 326625174 Psa6g3753 6 326618373 326625174 ECH