Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3720 ATGTTGGATCCATGGTTGAAGCTGTTTCTGCTGAAGCCGGTGATGCACCTCTTCACGCCATCGAAAGCCTCTGCATGCGCTGTCATCAAAACGGAACTACAAGATTTTATTTACTTCAATTTCAGGAAGATTTTATTGTTGGTTTTTGAATGTCCTCATTGTGGTGAGAGGAACCATGAAGTGCAGTTTGCTGGGGAGACTCAACCACATGGTTGTTGTTACTCGTTAGAGATTCCAGCGGGTGAACAAAAGATGTTCAATCGACAAGTGTTAAAATCAGAATCTGCTACCGTTAAGATACCCAAACTTGAATTTGAGATTCCACCAGAGACACAACATGGTAGTCTGTCAACGGTTGAAGGGATATTAATGCGAGCTGTTGATGAACTTCAGGCCCTTCAAGAGGAACGCAGAAAAGATGAAGGAACTCGTGATGAAGTGCTGGAAAGTGGAGAAGCAACGGCTTTTAGGAGAACGAGTAGACAACCCCACGGGTCAGTTGGGGAAGCCGCTGGTCAACGAGCTATTGCACAAAGTAATAGTGCAGGAATCGCAGATGCCTTATTTCGATATAGTGCGCCAGAAGAGGTGATGACTTTCCCGTCAACTTGTGGAACTTGTACCTCTAAATTCTCAGGACCAATACCGTATTGGTTAAGACAACAATTGCAAGTGTTAAGCTTACGAAAGAACCGATTCTCTGGAAGTCTTCTAGAGAGTCTTTGTTACTTAACAAACATTCAGTTGTTGGATCTCTCAGAAAACAATCTATCAGGACGAATTCCCAAATGCATTAAGAATTTTTATGCAATGTCTCAAGATGTTTCCTCAGCTATTACCACAGAATCCGTTTTATATTACACAGTTACCTATAGAGAGAACTTTGAAGGCTTTGATATTATTGCATTGTTGATGTGGAAAGGCGCAGAACAACAATTCAAGAATAATAAGCTCATGTTGAGGAGCTCGTTGAGAAAAGGACATAGCAACATATGGGATTTACGTGCTGCAATTGCAAGAGGTCCTGTCCTTGAACATATGGAAGTAGATTCTCGAAAGCAGCTATGGGGCAGTTTCCATATATGCCACCAGATCAAAGGGAAAGATGGGAAAGTATATTTGAGCTTATTGGAACTTATTGTTGACAAGCCTCCTCCTAGTGCTCCATCTGAACAATTTTATCTAGAATTTTATTCATTTATCTCTGCATGTCTACAGAAAGATTCGGGGAATAGACTGTCGGTTCAGGAACTTTTGGAACTTCCTTTTATCAGCATGTATGATGACCAACCATTTGCGGATGAGTCGGATGTAGCGGAAGCCGGTTCTCATGGTGATGTGGAAACCAGTTGCACAAGACCAAGCAAGTCATACTACATGCTTAAGATCACAGACCCGTATTCGCGACAATACGTACTGCTATGGCCTCGAGTTGTCCTAGCATCAACTGTCATGCCAGTTGCTAGTAAACCGAGATACTTTGTGATGGGAAAGAGATATGTTACACTTGTCTGGTCCAAGAGTTTGTCTGGAACTTTTCTTCAACAAGGATCAGAGAAGTGGCCAACGCCAACGCTCATGGAAGCAGCACACTTATCAGTATTATCCTTTCCCTCCGCCTTTGTTAGTGCTTGCAGTGTTGTGAGGTGGTTACTGTTCATTAGGCTCCGTTGCCGTTGGACTGTCAGCTATTCTCGCATTGGTGTTTGGCGGTATGCGATTTTGCTGCAGCTCTGTGACGTGTCGTTTGGTTGTTACTGCTTCTATTTTCCAGTGACATCTTTTGCAGTTTGTCTCGGCATCAGCCTTGATTCCGGTTCTCGTTAG 1827 0.4308 MLDPWLKLFLLKPVMHLFTPSKASACAVIKTELQDFIYFNFRKILLLVFECPHCGERNHEVQFAGETQPHGCCYSLEIPAGEQKMFNRQVLKSESATVKIPKLEFEIPPETQHGSLSTVEGILMRAVDELQALQEERRKDEGTRDEVLESGEATAFRRTSRQPHGSVGEAAGQRAIAQSNSAGIADALFRYSAPEEVMTFPSTCGTCTSKFSGPIPYWLRQQLQVLSLRKNRFSGSLLESLCYLTNIQLLDLSENNLSGRIPKCIKNFYAMSQDVSSAITTESVLYYTVTYRENFEGFDIIALLMWKGAEQQFKNNKLMLRSSLRKGHSNIWDLRAAIARGPVLEHMEVDSRKQLWGSFHICHQIKGKDGKVYLSLLELIVDKPPPSAPSEQFYLEFYSFISACLQKDSGNRLSVQELLELPFISMYDDQPFADESDVAEAGSHGDVETSCTRPSKSYYMLKITDPYSRQYVLLWPRVVLASTVMPVASKPRYFVMGKRYVTLVWSKSLSGTFLQQGSEKWPTPTLMEAAHLSVLSFPSAFVSACSVVRWLLFIRLRCRWTVSYSRIGVWRYAILLQLCDVSFGCYCFYFPVTSFAVCLGISLDSGSR* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3720 608 SMART zpr1 24 178 IPR004457 GO:0008270
Psa6g3720 608 Pfam ZPR1 zinc-finger domain 40 144 IPR004457 GO:0008270
Psa6g3720 608 Gene3D ZPR1, A/B domain 67 159 IPR042451 -
Psa6g3720 608 PANTHER ZINC FINGER PROTEIN ZPR1 157 209 IPR040141 -
Psa6g3720 608 PANTHER ZINC FINGER PROTEIN ZPR1 40 144 IPR040141 -
Psa6g3720 608 Gene3D Ribonuclease Inhibitor 196 280 IPR032675 -
Psa6g3720 608 Gene3D Transferase(Phosphotransferase) domain 1 284 449 - -
Psa6g3720 608 MobiDBLite consensus disorder prediction 135 152 - -
Psa6g3720 608 PANTHER ZPR1 ZINC-FINGER DOMAIN PROTEIN 40 144 - -
Psa6g3720 608 PANTHER ZPR1 ZINC-FINGER DOMAIN PROTEIN 157 209 - -
Psa6g3720 608 Coils Coil 116 143 - -
Psa6g3720 608 SUPERFAMILY Protein kinase-like (PK-like) 329 430 IPR011009 -
Psa6g3720 608 MobiDBLite consensus disorder prediction 135 172 - -
Psa6g3720 608 SUPERFAMILY L domain-like 209 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3720 Psa-Chr6 324195569 324201453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3720 158 227 C2H2 Transcription Factor Family AT5G22480 56.000 2.05e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3720 K06874 - egt:105950921 208.764