Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3714 ATGCAAAAAAACAAGGACCGTTACACCAACAACAACCCTTTTGTTGATGATTTCATTGATCCACTTTGCAAGCTTAACCTAAGAGAAACTTCTGAGTTTGTCAAATCTTTCCCATTACCAAAACCAAATGCAGAAAACACTAGATTCATCAATGATTCTTCAACACACCTGAGAAAACTAGAACCTCCTTCAACACCAGGTATACCACTTTTCAGCTTCACCTCTTCTCCATCTTCTTCCATTGTTGGAAGAATCAATCTTCCAAGAAAGAGTTTTCCTTCCAAATGGGATGATGCTGAAAAATGGCTCATAAGCACTTCCTGTCATGACTCACCAGGGAAACCGCCTCCAACCAAGATTTCGCACTTAACCGCGGATCCGCCGCCGCCGTTATTCGAGCGTTACCGTTTTCTCAGTTCCATTTATAGACACCACTCCAATGCTGAAGATGAGGTGATTTTTCCCACTCTAGATAGGCGTGTGAAGAATGTTGCAAAAACTTATTCTCTTGAGCACAAGGGTGAAAGCAATCTTTTTGATCATCTTTTTGAGTTGTTAAATTCTTCCATTAAGAATGACGAAAGTTTTCCAAGAGAATTAGCATCTTGCACAGGAGCCTTACAGACGTCAGTTAGTCAACACTTGGCAAAGGAAGAGGAACAAGTTTTTCCTCTGCTTATTGAGAAGTTCTCTCTTGAGGAACAAGCATCTTTAGTTTGGCAGTTTCTTTGCAGTATTCCTGTGAATATGATGGCAGAATTTCTTCCATGGCTTTCAACATCTATATCAGCAGATGAATCTCAGGATTTACGAGATTTCTTAGTCAAGATTGTGCCAGAGGAAAGGCTTCTTCAAAAGGTTGTTTTCACTTGGATGGAAGGAAGAAGTAGTGTTAATAAAATTCAAAGTAGTGCTGATCATTCTCAAGTATGTTGTTCCAGCCCGTTAACCCATCAGGCTGGAAGAGCCAATTGTGTATGCAAATCCACGACAACTAGAAAAAGGAAACATTCTGTAAACATGCAAGATGTTTCTGATGCCACCGGAACATACCACTATAGATGA 1065 0.4019 MQKNKDRYTNNNPFVDDFIDPLCKLNLRETSEFVKSFPLPKPNAENTRFINDSSTHLRKLEPPSTPGIPLFSFTSSPSSSIVGRINLPRKSFPSKWDDAEKWLISTSCHDSPGKPPPTKISHLTADPPPPLFERYRFLSSIYRHHSNAEDEVIFPTLDRRVKNVAKTYSLEHKGESNLFDHLFELLNSSIKNDESFPRELASCTGALQTSVSQHLAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAEFLPWLSTSISADESQDLRDFLVKIVPEERLLQKVVFTWMEGRSSVNKIQSSADHSQVCCSSPLTHQAGRANCVCKSTTTRKRKHSVNMQDVSDATGTYHYR* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3714 354 Pfam Hemerythrin HHE cation binding domain 129 226 IPR012312 -
Psa6g3714 354 Gene3D nmb1532 protein domain like 126 244 - -
Psa6g3714 354 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 130 351 - -
Psa6g3714 354 PANTHER CHY ZINC FINGER PROTEIN 130 351 - -
Psa6g3714 354 CDD Hr-like 133 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3714 Psa-Chr6 323815693 323817020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3714 131 337 C2H2 Transcription Factor Family AT3G18290 64.929 8.58e-84 274