Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3707 ATGGCTTCTGGTCACCGTCACGTAAGTTCCGGCTCAGACGGCGGAGATCTACTCCTCGACGAGAAGAAGAGAAAGCGAATGCTGTCGAACCGCGAATCCGCGAGGCGTTCGAGGATGAGGAAGCAGAAACAGATTGAAGATCTGGCCGAAGAAGCTGGCAGGTTGCAAAGTGAGAACGATTTCCTTAAGCAGAAGATTAAGGCGACGGAGGATGCATATACTGAAATGGAAGCGGCAAACAATGTTGTTAGGGCACAAACAATGGAGCTGAAAGATCGGTTACGCTTCCTCAACTCGGTGGTGAAAAATGCTGAAGATGCTAATGGTCGCTCTAATGATATGTCTCTGTTTTCTGATCCTCTTCTCAAGCCTTGGTTCATGCCTCATTCGAATTATGCTCTCATTGCTTCCAATGATATGTTGATGCATTGA 432 0.4722 MASGHRHVSSGSDGGDLLLDEKKRKRMLSNRESARRSRMRKQKQIEDLAEEAGRLQSENDFLKQKIKATEDAYTEMEAANNVVRAQTMELKDRLRFLNSVVKNAEDANGRSNDMSLFSDPLLKPWFMPHSNYALIASNDMLMH* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3707 143 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Psa6g3707 143 Gene3D - 20 75 - -
Psa6g3707 143 MobiDBLite consensus disorder prediction 16 45 - -
Psa6g3707 143 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 20 83 IPR004827 GO:0003700|GO:0006355
Psa6g3707 143 SUPERFAMILY Leucine zipper domain 22 76 IPR046347 GO:0003700|GO:0006355
Psa6g3707 143 Pfam bZIP transcription factor 22 80 IPR004827 GO:0003700|GO:0006355
Psa6g3707 143 MobiDBLite consensus disorder prediction 1 45 - -
Psa6g3707 143 Coils Coil 87 107 - -
Psa6g3707 143 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 142 - -
Psa6g3707 143 SMART brlzneu 18 82 IPR004827 GO:0003700|GO:0006355
Psa6g3707 143 CDD bZIP_plant_GBF1 23 73 IPR045314 GO:0003700|GO:0006355
Psa6g3707 143 Coils Coil 31 79 - -
Psa6g3707 143 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3707 Psa-Chr6 323247828 323249748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3707 1 141 bZIP Transcription Factor Family AT3G62420 44.444 4.57e-34 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa6g3707 bZIP_1 9.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3707 K25786 - gmx:778144 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3707 6 323247828 323249748 Psa6g3707 6 323247828 323249748 ECH