Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3701 ATGGTTTCCAAACCTAACGATTCTCCTCTAATTCTCCATCAAAAATTAGTTGAAGAGCCGGCGGATGATGCTGTTGGAGCCTTGTCCGCCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCAGAGAGGATTGAGTTCATTGGTGAAAAACTTCAGAGGAACCAGAAGAAGCTACAATGCCATATTTCAGGAATAATGGTAGCAATATCAACCAGGGACTCCTCACAGACAGAAGAAAACAAGACATGTTCAATTCTTTCTTCAAGAATGGACCATCCTTTATGTAAATTCGATGGTTTTATCCATGTTTCAGGAGACAAAGACCACAGCAATCAAGACATATCATCTGTTACAAGCATCAAGATTCCGCGTATTGAAAGATTGCCACCATATACATCGTGGATATTTTTGGATAGGAATCAGAGAATGGCTGAAGATCAGTCAGTCGTTGGAAGAAGACGGATCTACTATGATCAACGTGGAAGTGAGGCATTGATATGTAGCGACAGTGAGGAAGAATTAACAGAACCTGAGGAAGTAAAACATGAATTTTGTGAGGCTGAAGACCGTATTTTACGGATGGCATTTGAGGAACATGGGTTAAATGAAGAGGTACTGGATGTTGTTTGCAAGCATGTTGGGGGCACAAGTTTAGAAATCCAGGAGAGGTACAAAAGTATCAGGGAAAACACTACTGGTAGGTTGGGCCAGCATTCAAAAAGCTTAGGAGAACATGACTCTCCTATGAGCATGTATCTAGAGAAAACCCTGAGTGATGCACTAGATTCTCTTGATAACCTTTTTTGTCGCCGGTGCCTGATTTTCGATTGTCGACTGCATGGCTGTTCTCAACCTTTGATATGTCCGAGTGAAAAGCAAACAGTTTGGTCTGAGCCTGAAGGTAATAGGAAACCATGCGGTGATCAGTGTTACCTCCAGCAGTTAAATGACGTCAACAATTTTCCAAAAGATACAACTCCTGGATCTGTTCGGGATAAGAAAATTTTAATTGTAGAGGAGACAAATGGGAGAATGTCACCACCGTCCGCTGTCGAAGAACCTGAAAATCAGAGTACTAAACTTTCGACAAGACTTGATTGCCATGGATATCTTAATTTAAATGACCATGTCTCACAAAATTTAGAGAAACGGAAAGTCACAAATCAGCCAGACTCAAGATTGCCTCCTGATTCTCCGAATTCTAGTAAAAAGCTAAAAAGAGTCTCAGATGATGTAGTTACTGTAATTAGTAATAATAGTAAGAACCTAAACCTGGGCGCATGTGATGAAAATAAACATATAAATACTTCTGCAATTTTGGGCAACCCGGTTGAACACACTTCGAATAAACTAATAGTTCCTTCTAGCACTTGCCACAATGAGAGTGACAAAGGTGTTGTGAATGGATCCAAAGTTGTCACAAATGAGACAGAACTTAAAAACCCATTGAATTCAATGGAAGAACAGGCTGATGAAATGCTAGGTTTCTCAGATTGGAAACCTCTAGAGAAAGAGTTATACTTGAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCTAGGAACTTATTTTCTGGTTTGAAGACTTGCATGGAAATATCTAGTTACATGCATGATCGAGGAGTATCAATGCCCCACAGATCCATCGCTGCAGCTAATTCAATCATGGATGACAAGGGAAAATTTGACACAGAGTGCACAGACCAAGACATGCCATCTAGGTCACGGTTGCTGAGAAAAAGAGGCAAAACAAGAAAGTTTAAATATTCTTGGAAGTCTGCTGGTCACCCAACAATATGGAAAAGAATTGCTGATGGAAAAAACCAATCTTGCAAGCAGTATACGCCTTGTGAATGTCAATCAATGTGTGGAAAGGATTGTTCTTGTGTTAATGGTGGGACATGCTGTGAAAAATATTGTGGTTGTTCGAAGAGCTGCAAAAATCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGACGTGAATGTGATCCAGACGTATGTCGAAACTGTTGGGTTAGCTGTGGGGATGGCACATTAGGGGAGCCACCACGGCGTGGAGAAGGTCAATGTGGAAATATGAGACTTCTTTTAAGGCAACAACAGAGGATTCTCTTGGGGAAGTCCGATGTTGCAGGATGGGGAGCCTTCTTGAAGAATCCTGTTAACAAAAATGATTACCTAGGAGAGTACACAGGTGAATTGATCTCACACAGAGAAGCTGATAAGCGTGGAAAAATATATGATCGTGCAAATTCATCTTTCCTTTTCGATTTGAATGAGCAGTTCGTTCTTGATGCTTATCGGAAAGGAGACAAGTTGAAATTTGCAAACCACTCATCAAACCCCAACTGCCATGCAAAGGTGATTTTGGTTGCTGGAGATCATCGGGTTGGCATATTCGCCAAGGAACACATTGATACCAGTGAGGAGCTCTTCTATGATTATCGCTATGGTCCAGATCAAGCACCTCCATGGGCTCGTAAACCTGAGGGTTCCAAGAGAGACGAATCAGAAGGTAGGGCGAAGAAACATCAATCCCATTGA 2586 0.4153 MVSKPNDSPLILHQKLVEEPADDAVGALSAKINQLKKQIQAERIEFIGEKLQRNQKKLQCHISGIMVAISTRDSSQTEENKTCSILSSRMDHPLCKFDGFIHVSGDKDHSNQDISSVTSIKIPRIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQRGSEALICSDSEEELTEPEEVKHEFCEAEDRILRMAFEEHGLNEEVLDVVCKHVGGTSLEIQERYKSIRENTTGRLGQHSKSLGEHDSPMSMYLEKTLSDALDSLDNLFCRRCLIFDCRLHGCSQPLICPSEKQTVWSEPEGNRKPCGDQCYLQQLNDVNNFPKDTTPGSVRDKKILIVEETNGRMSPPSAVEEPENQSTKLSTRLDCHGYLNLNDHVSQNLEKRKVTNQPDSRLPPDSPNSSKKLKRVSDDVVTVISNNSKNLNLGACDENKHINTSAILGNPVEHTSNKLIVPSSTCHNESDKGVVNGSKVVTNETELKNPLNSMEEQADEMLGFSDWKPLEKELYLKGVEMFGRNSCLIARNLFSGLKTCMEISSYMHDRGVSMPHRSIAAANSIMDDKGKFDTECTDQDMPSRSRLLRKRGKTRKFKYSWKSAGHPTIWKRIADGKNQSCKQYTPCECQSMCGKDCSCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGTLGEPPRRGEGQCGNMRLLLRQQQRILLGKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNEQFVLDAYRKGDKLKFANHSSNPNCHAKVILVAGDHRVGIFAKEHIDTSEELFYDYRYGPDQAPPWARKPEGSKRDESEGRAKKHQSH* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3701 861 CDD SET_EZH 715 831 - -
Psa6g3701 861 ProSiteProfiles SET domain profile. 715 830 IPR001214 GO:0005515
Psa6g3701 861 Coils Coil 25 45 - -
Psa6g3701 861 SUPERFAMILY SET domain 587 834 IPR046341 -
Psa6g3701 861 SMART sant 180 230 IPR001005 -
Psa6g3701 861 SMART sant 495 545 IPR001005 -
Psa6g3701 861 MobiDBLite consensus disorder prediction 837 861 - -
Psa6g3701 861 SMART CXC_2 650 687 IPR033467 -
Psa6g3701 861 Pfam CXC domain 654 685 IPR041355 -
Psa6g3701 861 Pfam SET domain 726 829 IPR001214 GO:0005515
Psa6g3701 861 SMART set_7 715 836 IPR001214 GO:0005515
Psa6g3701 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 19 859 IPR045318 GO:0006338|GO:0018024
Psa6g3701 861 Gene3D SET domain 616 832 IPR046341 -
Psa6g3701 861 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 19 861 IPR025778 GO:0031519
Psa6g3701 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 19 859 - -
Psa6g3701 861 MobiDBLite consensus disorder prediction 841 861 - -
Psa6g3701 861 ProSiteProfiles CXC domain profile. 602 701 IPR026489 -
Psa6g3701 861 MobiDBLite consensus disorder prediction 383 408 - -
Psa6g3701 861 MobiDBLite consensus disorder prediction 339 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3701 Psa-Chr6 323066892 323075961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3701 704 833 C2H2 Transcription Factor Family AT2G23740 23.810 5.26e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa6g3701 SET 5.3e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3701 6 323066892 323075961 Psa6g3701 6 323066892 323075961 ECH