Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3692 ATGCGGAACCCCGTTCACACACAAAACCCGTTAACCAGTCAAACATCACGTATGAAAGCATCCACTCCATTCCCTCATGCATTCAATGCCACCGGCTGTACCATTTGGTCACCTACAATTGCCGGTCAACTATTCCTTTTCATTTCTATTTCTATCTTTCTTTGTTCCTTTCACACTCTCTCTCTTTCTCTCTCTCTCTCTGAAACTGTTACTATTATCTCAAAGAGTGTGTTGTTGTCTACAAATGAAGGATTTGGATTTGTGCATTTGAGATATTCATCTAGGTATATGGAGAAGAAAGAGATGGCTGTGATGAGTGTGAAGAGTGAAGAAGATGTTGTTGTTGGTGTTGGTGGTGGTGGTTCTTCATCTTTGCTAAACGGTTTTCAGTTTTCAAGCGTGTTTGATTTCTATGAGGTAGAAAAAAGCTCTTCTTTAGGGTTTATGGAGTTACTGGGTGTGGAAAACTATAGTTCTTTGCTTGATGTACCGCAACTATCAACCATGAGTCATCATCAAACTACAGTTAAGTCTTCATCTGATACTAATGGAAAAGAGTGTTCTGAGGTTTTGAATCATCTTCCTCAAACTCCTAACTCTTGCTCGATTTCATCGGCCTCTAGTGAAGCAGTTAATGATGAACAACATAATAAGATTCTTGTTGACCAAGTCCAAGAAGATGAAGATGAAGAAGAAGAAGAAAAACAAAAAACCAGCAAACAGTTGAAGACTAAGAAGACAAATCAAAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTCAAAAACAGCCCCTTTCCGAGGAGCTATTATCGCTGCACCACTGTTTCATGTAATGTGAAGAAACGTGTGGAGCGGTCTTATACTGATCCAACCATTGTAGTCACAACTTATGAAGGCCAACACATTCATCCTAGTCCAGCTATGTCCCGTTCCGCCTTCGCCGGAGTTCAGATACCACCGCCGAACGCTGTATCCGGTGGGTTTCCAACAAACTTTGGTTCAGTTTTGCAAGGGAACTACTTGTCTCAATATCAGCAGCAACAACACCATCAACATCAACATCAACAGCTACTGGTTAATACATTGTCCTCTTTGAGTCACCCTTACCACCAAGAGAGGAAGCTTTGTAATCCAGGGACAAGTTCCTTTCTTAGGGACCATGGTCTTCTTCAAGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAA 1275 0.4141 MRNPVHTQNPLTSQTSRMKASTPFPHAFNATGCTIWSPTIAGQLFLFISISIFLCSFHTLSLSLSLSETVTIISKSVLLSTNEGFGFVHLRYSSRYMEKKEMAVMSVKSEEDVVVGVGGGGSSSLLNGFQFSSVFDFYEVEKSSSLGFMELLGVENYSSLLDVPQLSTMSHHQTTVKSSSDTNGKECSEVLNHLPQTPNSCSISSASSEAVNDEQHNKILVDQVQEDEDEEEEEKQKTSKQLKTKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTVSCNVKKRVERSYTDPTIVVTTYEGQHIHPSPAMSRSAFAGVQIPPPNAVSGGFPTNFGSVLQGNYLSQYQQQQHHQHQHQQLLVNTLSSLSHPYHQERKLCNPGTSSFLRDHGLLQDVVPSHMLKEE* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3692 424 MobiDBLite consensus disorder prediction 223 254 - -
Psa6g3692 424 Gene3D WRKY domain 252 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa6g3692 424 PANTHER WRKY TRANSCRIPTION FACTOR 97 416 - -
Psa6g3692 424 Coils Coil 217 248 - -
Psa6g3692 424 Pfam WRKY DNA -binding domain 269 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa6g3692 424 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 416 IPR044810 GO:0003700
Psa6g3692 424 SUPERFAMILY WRKY DNA-binding domain 260 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa6g3692 424 ProSiteProfiles WRKY domain profile. 263 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa6g3692 424 SMART WRKY_cls 268 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3692 Psa-Chr6 322606521 322609357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3692 133 424 WRKY Transcription Factor Family AT2G47260 48.012 2.94e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa6g3692 WRKY 5.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3692 - - aprc:113872234 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3692 6 322606521 322609357 Psa6g3692 6 322606521 322609357 ECH
Psa3g0451 3 42563335 42565900 Psa6g3692 6 322606521 322609357 PCT