Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3678 ATGGTAAGGAGAATGGCAGCATGTACCATTTCCATGCTAGATGAATGGAAAAGGCAATTAGCCATTGAAGCAAAGAACAAATCATTGACAATAGAAGTGAGTGAAGAATTTCGAGAACTAACATCTGATATAATAGCTCACACTTCCTTTGGTACTAGCTTTGCTCATGGAAAAGAAGCCTTTAATGCACAAACAAAGCTTCAACATCTTATTGTTGCTTCAAGTTCTGATGTTTTCATTCCTGGCACTCAATATATTCCTACTAGGACAAATTTGGAGATATGGAAGCTTGATGGGAAAATGAAGAAATCACTAAAATGCATTATCGAAAGTAGGTTGAATTCTCAGTCAGATAGCTCCTTTTATGGAGATGATCTACTAGGCATAATGATGGATACAAAAAATGACGGTCCAAATAAGTTGAACATGAATGAAATCATGGAAGAGTGCAAGACATTTTTCTTTAGTGGTCATGAAACCACTTCAAGCTTACTTGTTTGGACTGTCTTTTTGTTGAGTTTGCATACAGACTGGCAAGAAAAACTTAGACAAGAAGTCATGCAGATTTGTGGCATGGAAGTTCCTGATCCAGATATGCTATCAAAGCTAAAAATGGTGAATATGGTGTTGCTGGAATCATTAAGGTTGTATTGTCCTGCAATAGAAACAGGAAGAATGGCTTCAAAAGATATGAAACTAGGAGATTTGATGATCCCAAGAGGAACAAGTCTCATGATCCCAATTGCAATGATTCACAGAAGTAAAGAATACTGGGGTGAAGATTCAAATGAGTTTAATCCAATGAGATTCATAAATGGAGCATATAAGGCTGCAAAACACCCAAATGCACTACTTCCGTTTTCGTTGGGTCCAAGAAATTGCATTGGTCAAAATTTTGCAATGCTGGAAGCTAAAACAGTGATGGCTTTAATTCTTCAGAGGTTTTCATGGTCTCTTTCTCCTGACTATCAACATGCACCTGTTCACAACCTCACTTTGCAGGCACAACATGGTCTTCCCATCATTATAAAACCATTGCATCTATAA 1047 0.3725 MVRRMAACTISMLDEWKRQLAIEAKNKSLTIEVSEEFRELTSDIIAHTSFGTSFAHGKEAFNAQTKLQHLIVASSSDVFIPGTQYIPTRTNLEIWKLDGKMKKSLKCIIESRLNSQSDSSFYGDDLLGIMMDTKNDGPNKLNMNEIMEECKTFFFSGHETTSSLLVWTVFLLSLHTDWQEKLRQEVMQICGMEVPDPDMLSKLKMVNMVLLESLRLYCPAIETGRMASKDMKLGDLMIPRGTSLMIPIAMIHRSKEYWGEDSNEFNPMRFINGAYKAAKHPNALLPFSLGPRNCIGQNFAMLEAKTVMALILQRFSWSLSPDYQHAPVHNLTLQAQHGLPIIIKPLHL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3678 348 PANTHER P450, PUTATIVE-RELATED 1 342 - -
Psa6g3678 348 PRINTS P450 superfamily signature 156 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 PRINTS P450 superfamily signature 208 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 PRINTS P450 superfamily signature 285 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 Gene3D Cytochrome P450 1 346 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 PRINTS E-class P450 group I signature 145 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 PRINTS E-class P450 group I signature 165 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 PRINTS E-class P450 group I signature 284 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 PRINTS E-class P450 group I signature 294 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 SUPERFAMILY Cytochrome P450 2 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g3678 348 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 342 - -
Psa6g3678 348 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 287 296 IPR017972 GO:0005506|GO:0016705
Psa6g3678 348 Pfam Cytochrome P450 3 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3678 Psa-Chr6 320986405 320987708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3678 1 347 Cytochrome P450 AT2G46960 52.557 2.50e-132 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3678 K20660 - aprc:113872106 513.457