Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3669 ATGGTTCCAAAAACTCATCTCCAATGCATTCTATTTCTTCTTTCATTGTTATACACCACTTGCAGATTAGAAATGGAGTCTGATTTTGACAAGTGGGTATCATGGAACATGAAGAGTCACCAAAGAAAGACCATTCTAGAAAACAAAAGAAGTGGTCTTGATTTGAAGCTACAACAAGCAGAGAGTAACAAAACTATCTTAACAGTTAGCAAAGATGGTGGTGCTGATTTCAACACTATAAATGAAGCTATTAATAGCATTTCACCACACAATACTAGAAGAGTTGTTGTATCCATTGCACCTGGTGTTTATAGGGAGAAGGTTGTCATCCCCGAATCATTGCCATTTGTAACATTTTTAGGAAATGCAAATGATCAGCCGACTATCAGTGCAAATGATACATCATCTGTTACGCGAAGTGATGGGACTACGTTGAAGACGTTCAATAGTGCAACCGTTGCTGTGAATGCTAGCTATTTTATAGCCATTAATATTATATTTGAGAATAATGCTTCATATTTGGAATCGAAAGTAGAACAAGCTGTTGCGCTTCGAATCTCTGGAAATAAATCAGCTTTTTACAATTGTTCTTTCTATGGAGTTCAAGACACTTTGTATGATCACAAAGGCATTCACTATTTCAAAAACTGTTTTATTCAAGGTTCAACTGATTTCATATTTGGCTATGGGAGGACTCTTTATGAGAATTGCACTCTAAATTCCGTAACCAAGAACGTGACCTCCATCACAGCTCAAAAGCGATCAAACTCGTCTCTTGATAGTGGATTTTCCTTCAAAAATTGCAATGTAACAGGTAGTGGACATGTTTATCTTGGAAGACCATGGGGAGAATATTCCAGAGTTGTATATTCTTACACGTTCATGGACACAATTGTTCTCCCTAAAGGATGGGATGAGAGTTGGGGTGACCAAAAGCGTAACATGACGGTATATTATGGAGAGTACAAGTGTAGTGGACCTGGATCCAACTTGTCGAAAAGAGTTCCATGGGCACGGATGCTAACGGACGAAGAGGCCCAACTTTTTATTGGAATCGATTTTATTCAAGGGGATACTTGGCTCATTAGCCCTTAA 1095 0.3826 MVPKTHLQCILFLLSLLYTTCRLEMESDFDKWVSWNMKSHQRKTILENKRSGLDLKLQQAESNKTILTVSKDGGADFNTINEAINSISPHNTRRVVVSIAPGVYREKVVIPESLPFVTFLGNANDQPTISANDTSSVTRSDGTTLKTFNSATVAVNASYFIAINIIFENNASYLESKVEQAVALRISGNKSAFYNCSFYGVQDTLYDHKGIHYFKNCFIQGSTDFIFGYGRTLYENCTLNSVTKNVTSITAQKRSNSSLDSGFSFKNCNVTGSGHVYLGRPWGEYSRVVYSYTFMDTIVLPKGWDESWGDQKRNMTVYYGEYKCSGPGSNLSKRVPWARMLTDEEAQLFIGIDFIQGDTWLISP* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3669 364 SUPERFAMILY Pectin lyase-like 64 361 IPR011050 -
Psa6g3669 364 Coils Coil 43 63 - -
Psa6g3669 364 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Psa6g3669 364 Pfam Pectinesterase 68 358 IPR000070 GO:0030599|GO:0042545
Psa6g3669 364 PANTHER PECTINESTERASE 22 362 - -
Psa6g3669 364 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 22 362 - -
Psa6g3669 364 Gene3D - 60 363 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3669 Psa-Chr6 319143806 319146192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3669 24 364 Carbohydrate Esterase AT5G07430 40.816 6.58e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3669 K01051 - cit:102614801 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3669 6 319143806 319146192 Psa6g3669 6 319143806 319146192 ECH
Psa3g0908 3 86512640 86514356 Psa6g3669 6 319143806 319146192 PCT