Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3665 ATGCTTAGAATCCATGCAATCATTATCGCTACTTTGGTTCTAGTTATTCTCTCTGTTTCATCATCCTCGTCTTTGGAGTTTGGTTTCTATAAGAAAACATGTCCATCCGCTGAAGCAATTGTTAGAAGAGCTGTAAACAAAGCAGTTTCACTCAACCCAGGCATCGCTGCTGACAGTACTCGCAAAGTTAGTGGCGGCATAGACTACTCAGTACCATCAGGACGCAGAGATGGTAGAATCTCTATCATGGACGAAGTCACACAAAATCTACCACCACCAACTTTCAAAGCGGAGGAGCTTATCCAACGTTTTTCCATAAAAGGTTTATCAGCAGATGAAATGGTTACACTTTCTGGAGCTCATTCTATTGGTGTCTCGCATTGTTCCTCTTTCTCAAACCGATTATACTCTTTCAACGCTACGTTTTCTCAAGATCCTTCCATGGACCCTAAGTTTGCTATGATGTTGAAATCCAAGTGTCCACCACCACAATCACAGACAAGAGACCCAACGGTGGTGTTTGATGGTTCAACACCTAATGATTTGGACAACATGTACTATATGAAGTTGAAGAATAAGCGTGGTTTATTAACTTCAGATCAAACGTTGGCCGATAGTGAGTTAACTAAGAAAATGGTGTTAAAAAATGCTAGACATAGTGCAATATGGAGAGTGAAGTTTGCAAAGGCCATGGTGCATATGGGTTCCATACAAGTCTTGACAGGTTCTCAAGGAACAATTGTCTGCAACAGTGAGATGTTCACGATGGTTTTGATGATGACAACAGTATGA 792 0.4104 MLRIHAIIIATLVLVILSVSSSSSLEFGFYKKTCPSAEAIVRRAVNKAVSLNPGIAADSTRKVSGGIDYSVPSGRRDGRISIMDEVTQNLPPPTFKAEELIQRFSIKGLSADEMVTLSGAHSIGVSHCSSFSNRLYSFNATFSQDPSMDPKFAMMLKSKCPPPQSQTRDPTVVFDGSTPNDLDNMYYMKLKNKRGLLTSDQTLADSELTKKMVLKNARHSAIWRVKFAKAMVHMGSIQVLTGSQGTIVCNSEMFTMVLMMTTV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3665 263 PRINTS Haem peroxidase superfamily signature 65 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g3665 263 PRINTS Haem peroxidase superfamily signature 113 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g3665 263 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g3665 263 PANTHER PEROXIDASE 56 247 - -
Psa6g3665 263 PANTHER PEROXIDASE 15 58 - -
Psa6g3665 263 SUPERFAMILY Heme-dependent peroxidases 25 253 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa6g3665 263 Pfam Peroxidase 56 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g3665 263 Gene3D Peroxidase, domain 2 91 234 - -
Psa6g3665 263 ProSiteProfiles Plant heme peroxidase family profile. 36 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g3665 263 Gene3D - 25 58 - -
Psa6g3665 263 ProSitePatterns Peroxidases proximal heme-ligand signature. 113 123 IPR019793 -
Psa6g3665 263 Gene3D - 59 250 - -
Psa6g3665 263 PANTHER PEROXIDASE 25-RELATED 15 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g3665 263 PANTHER PEROXIDASE 25-RELATED 56 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3665 Psa-Chr6 318740903 318744539 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3665 54 244 Peroxidase AT5G51890 43.455 3.60e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3665 K00430 - twl:119983135 258.84